RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 COL8A1P27658 744 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 HPDP32754 393 aaPredicted RBP11.55□□□□□ -0.56
CLDN12-213ENST00000496677 MAGEA12P43365 314 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 NAA30Q147X3 362 aaPredicted RBP11.55□□□□□ -0.56
CLDN12-213ENST00000496677 ACAP2Q15057 778 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 HIST2H2ACQ16777 129 aaPredicted RBP11.55□□□□□ -0.56
CLDN12-213ENST00000496677 TMEM35AQ53FP2 167 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 PAGE2BQ5JRK9 111 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 HIST2H2AA3Q6FI13 130 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 SLC25A25Q6KCM7 469 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 TRIM40Q6P9F5 258 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 GFRALQ6UXV0 394 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 SIAH3Q8IW03 269 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 B3GNT7Q8NFL0 401 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 ADAMTS18Q8TE60 1221 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 EXT2Q93063 718 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 ISL2Q96A47 359 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 CSF3RQ99062 836 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 TBCDQ9BTW9 1192 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 KLHL1Q9NR64 748 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 LRFN1Q9P244 771 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 OPTCQ9UBM4 332 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 SEC14L3Q9UDX4 400 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 CRYBG3Q68DQ2 2970 aa11.55□□□□□ -0.56
CLDN12-213ENST00000496677 A0A088AWK7 358 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 A0A096LPK6 155 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 LRRC14BA6NHZ5 514 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 SYCE1LA8MT33 242 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 CLDN4O14493 209 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 MYO1DO94832 1006 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 UNC5CO95185 931 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 KLHL2O95198 593 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 TGFB1P01137 390 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 CD46P15529 392 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 ZNF10P21506 573 aaPredicted RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 MSH2P43246 934 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 HLCSP50747 726 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 ALDH18A1P54886 795 aaKnown RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 PCBP2Q15366 365 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 ZRSR2Q15696 482 aaKnown RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 FAM83EQ2M2I3 478 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 RNFT1Q5M7Z0 435 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 DEPDC1Q5TB30 811 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 C1QL3Q5VWW1 255 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 GRHL2Q6ISB3 625 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 MED27Q6P2C8 311 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 GALNTL5Q7Z4T8 443 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 PLD6Q8N2A8 252 aaKnown RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 ACOT4Q8N9L9 421 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 FAM47BQ8NA70 645 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 SRFBP1Q8NEF9 429 aaKnown RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 THAP3Q8WTV1 239 aaPredicted RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 PTPMT1Q8WUK0 201 aaPredicted RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 SLC44A1Q8WWI5 657 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 UBE2E3Q969T4 207 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 ANKRD9Q96BM1 317 aaPredicted RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 MRRFQ96E11 262 aaKnown RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 FRMD6Q96NE9 622 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 KCNC2Q96PR1 638 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 MAPKAP1Q9BPZ7 522 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 DEFB126Q9BYW3 111 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 PNO1Q9NRX1 252 aaKnown RBP11.54□□□□□ -0.56
CLDN12-213ENST00000496677 VTI1BQ9UEU0 232 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 ZNF835Q9Y2P0 537 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 MYO7BQ6PIF6 2116 aa11.54□□□□□ -0.56
CLDN12-213ENST00000496677 TRBV11-1A0A0K0K1C0 115 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 RTCAO00442 366 aaKnown RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 PRKNO60260 465 aaPredicted RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 NME2P1O60361 137 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ZG16O60844 167 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 SLC25A12O75746 678 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 EPB42P16452 691 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 NME2P22392 152 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 HIST1H1TP22492 207 aaPredicted RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 EEF1DP29692 281 aaKnown RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 SERPINB1P30740 379 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 PHBP35232 272 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 DCTP40126 519 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 PIK3CBP42338 1070 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 CYB561P49447 251 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 CLCN2P51788 898 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 OC90Q02509 493 aaPredicted RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 TGM3Q08188 693 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 SLC13A2Q13183 592 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ELAVL1Q15717 326 aaKnown RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 PFKFB4Q16877 469 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 KHDRBS2Q5VWX1 349 aaKnown RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 LIPJQ5W064 366 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 CHSY3Q70JA7 882 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 FJX1Q86VR8 437 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 CHERPQ8IWX8 916 aaKnown RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 RNF175Q8N4F7 328 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 TEX9Q8N6V9 391 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 HORMAD2Q8N7B1 307 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 NCLNQ969V3 563 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms