RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GNPDA2Q8TDQ7 276 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 BARD1Q99728 777 aaKnown RBP18.44■□□□□ 0.54
COL27A1-207ENST00000494090 GAL3ST1Q99999 423 aa18.44■□□□□ 0.54
COL27A1-207ENST00000494090 A0A1B0GVI7 797 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 HEXBP07686 556 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 CENPSQ8N2Z9 138 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 OR5P2Q8WZ92 322 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 A8MU76 341 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF878C9JN71 531 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 CH25HO95992 272 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF45Q02386 682 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 C4orf46Q504U0 113 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 CMPK2Q5EBM0 449 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF367Q7RTV3 350 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 SERINC5Q86VE9 423 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 OR4K1Q8NGD4 311 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 DNAJC27Q9NZQ0 273 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF182P17025 639 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ENTPD1P49961 510 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 MAZP56270 477 aaKnown RBP18.43■□□□□ 0.54
COL27A1-207ENST00000494090 OCLNQ16625 522 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF782Q6ZMW2 699 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-207ENST00000494090 Q6ZVL8 140 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 SLC44A3Q8N4M1 653 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 TCEANCQ8N8B7 351 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 HAPLN2Q9GZV7 340 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 PREBQ9HCU5 417 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 NRXN3Q9Y4C0 1643 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 J3QLW9 94 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 MAN2B1O00754 1011 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 NPC1O15118 1278 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 TRAPPC6AO75865 159 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 APBB3O95704 486 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 JMJD7P0C870 316 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 PABPC4LP0CB38 370 aaKnown RBP18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF19P17023 458 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 SELENOVP59797 346 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF423Q2M1K9 1284 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF280BQ86YH2 543 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 INO80EQ8NBZ0 244 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-207ENST00000494090 GLYATL1Q969I3 302 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 DOHHQ9BU89 302 aa18.43■□□□□ 0.54
COL27A1-207ENST00000494090 HTR1AP08908 422 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 BCKDHAP12694 445 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 RPS3AP61247 264 aaKnown RBP18.42■□□□□ 0.54
COL27A1-207ENST00000494090 SLC3A1Q07837 685 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 IRF5Q13568 498 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 SUSD1Q6UWL2 747 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 KRTCAP2Q8N6L1 136 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 PDLIM7Q9NR12 457 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 PRTFDC1Q9NRG1 225 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 HRASLS2Q9NWW9 162 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 ASB6Q9NWX5 421 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 PHLPP1O60346 1717 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 DLGAP1O14490 977 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 FARS2O95363 451 aaKnown RBP18.42■□□□□ 0.54
COL27A1-207ENST00000494090 IFNA7P01567 189 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 EPCAMP16422 314 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 GKP32189 559 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 KANK2Q63ZY3 851 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 HSDL2Q6YN16 418 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 MSANTD1Q6ZTZ1 278 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 HERPUD2Q9BSE4 406 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 MARCH4Q9P2E8 410 aaPredicted RBP18.42■□□□□ 0.54
COL27A1-207ENST00000494090 RHCGQ9UBD6 479 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 CDKL1Q00532 357 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 FADDQ13158 208 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 LASP1Q14847 261 aaKnown RBP18.42■□□□□ 0.54
COL27A1-207ENST00000494090 JAGN1Q8N5M9 183 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF675Q8TD23 568 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 HTR3EA5X5Y0 456 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 RHOP08100 348 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 HLA-EP13747 358 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 GLP1RP43220 463 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 GRM2Q14416 872 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 PRR11Q96HE9 360 aaPredicted RBP18.42■□□□□ 0.54
COL27A1-207ENST00000494090 FAM129BQ96TA1 746 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 TM9SF2Q99805 663 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 MAU2Q9Y6X3 613 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 MYH8P13535 1937 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 CCRL2O00421 344 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 KDM4BO94953 1096 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 GJB5O95377 273 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 ARMCX6Q7L4S7 300 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 LRRC20Q8TCA0 184 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 ORAI3Q9BRQ5 295 aa18.42■□□□□ 0.54
COL27A1-207ENST00000494090 LEFTY1O75610 366 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 SNAPC5O75971 98 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 MT-ND5P03915 603 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 C1GALT1C1LP0DN25 315 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 IFI30P13284 250 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 MAD2L1BPQ15013 274 aaPredicted RBP18.41■□□□□ 0.54
COL27A1-207ENST00000494090 ANKDD1AQ495B1 522 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 DGLUCYQ7Z3D6 616 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 THEM6Q8WUY1 208 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 ARHGAP39Q9C0H5 1083 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 PLAGL1Q9UM63 463 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 COL2A1P02458 1487 aaPredicted RBP18.41■□□□□ 0.54
COL27A1-207ENST00000494090 SLITRK5O94991 958 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms