RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 LINGO1Q96FE5 620 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 CERS2Q96G23 380 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 CABS1Q96KC9 395 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 ZNF285Q96NJ3 590 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 OR2A5Q96R48 311 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 KRT12Q99456 494 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 NAP1L3Q99457 506 aaPredicted RBP5.6□□□□□ -1.51
CDHR3-213ENST00000488386 NAPGQ99747 312 aaPredicted RBP5.6□□□□□ -1.51
CDHR3-213ENST00000488386 FAM167BQ9BTA0 163 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 SSBP3Q9BWW4 388 aaPredicted RBP5.6□□□□□ -1.51
CDHR3-213ENST00000488386 CHRNA10Q9GZZ6 450 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 DPH5Q9H2P9 285 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 SPNS1Q9H2V7 528 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 ZNF304Q9HCX3 659 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 SMYD2Q9NRG4 433 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 UTP6Q9NYH9 597 aaKnown RBP5.6□□□□□ -1.51
CDHR3-213ENST00000488386 KCMF1Q9P0J7 381 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 TRMT6Q9UJA5 497 aaKnown RBP5.6□□□□□ -1.51
CDHR3-213ENST00000488386 PDE10AQ9Y233 779 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 PCDHGA9Q9Y5G4 932 aaKnown RBP5.6□□□□□ -1.51
CDHR3-213ENST00000488386 PSAT1Q9Y617 370 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 MYO18BQ8IUG5 2567 aa5.6□□□□□ -1.51
CDHR3-213ENST00000488386 A0A0A6YYJ9 748 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 MAGEB16A2A368 324 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 ZNF860A6NHJ4 632 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TCP11X1B4DZS4 312 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TARM1B6A8C7 271 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 GFYI3L273 518 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 AGPSO00116 658 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TP73O15350 636 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 FOXS1O43638 330 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 ZBTB14O43829 449 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 LCMT2O60294 686 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 DNAJB6O75190 326 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 GUCA1CO95843 209 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TSPAN12O95859 305 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 CDH1P12830 882 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TCP1P17987 556 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 IL1RNP18510 177 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 FBLP22087 321 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 ATP5DP30049 168 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 RPL21P46778 160 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 OLR1P78380 273 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 PRDX1Q06830 199 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 PDIA2Q13087 525 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 NAE1Q13564 534 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TRADDQ15628 312 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 INPP5JQ15735 1006 aaPredicted RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 RBBP7Q16576 425 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 EIF2S3LQ2VIR3 472 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 PRTGQ2VWP7 1150 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TTLL9Q3SXZ7 439 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 FBXO48Q5FWF7 155 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TCTE1Q5JU00 501 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 SPANXN3Q5MJ09 141 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TEDDM1Q5T9Z0 273 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 PAPD7Q5XG87 772 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 ZNF425Q6IV72 752 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 HIBCHQ6NVY1 386 aaPredicted RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 AGTRAPQ6RW13 159 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 LINC00696Q6ZRV3 163 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 ESPNLQ6ZVH7 1005 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 NEK10Q6ZWH5 1172 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 MED25Q71SY5 747 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 VN1R4Q7Z5H5 301 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 LYSMD2Q8IV50 215 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 MYO1HQ8N1T3 1032 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 SPATA6LQ8N4H0 392 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 AMER3Q8N944 861 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 CLEC1AQ8NC01 280 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 FBXO36Q8NEA4 188 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 CATSPER1Q8NEC5 780 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 OR9A4Q8NGU2 314 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 CFHR4Q92496 578 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 MIEF2Q96C03 454 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 MOCOSQ96EN8 888 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 MMABQ96EY8 250 aaPredicted RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 SCYL1Q96KG9 808 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 CNDP1Q96KN2 507 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TSNARE1Q96NA8 513 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 SMAD5Q99717 465 aaKnown RBP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 SOX7Q9BT81 388 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 CRB3Q9BUF7 120 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 ZNF160Q9HCG1 818 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 SLAMF7Q9NQ25 335 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 FAM114A2Q9NRY5 505 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 ASF1BQ9NVP2 202 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 PLA2G3Q9NZ20 509 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 HCN3Q9P1Z3 774 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 TRPC4Q9UBN4 977 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 C3orf18Q9UK00 162 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 NTNG1Q9Y2I2 539 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 SAR1BQ9Y6B6 198 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.59□□□□□ -1.51
CDHR3-213ENST00000488386 DOPEY2Q9Y3R5 2298 aa5.59□□□□□ -1.51
CDHR3-213ENST00000488386 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
CDHR3-213ENST00000488386 A1L4Q6 167 aa5.58□□□□□ -1.52
CDHR3-213ENST00000488386 NPEPPSL1A6NEC2 478 aa5.58□□□□□ -1.52
CDHR3-213ENST00000488386 VSTM2BA6NLU5 285 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms