RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 RNF215Q9Y6U7 377 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MYH15Q9Y2K3 1946 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 UMODL1Q5DID0 1318 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 A0A087X002 238 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 TMEM129A0AVI4 362 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 MPTX1A8MV57 137 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 RNF103O00237 685 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 RTCAO00442 366 aaKnown RBP3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 TNFSF12O43508 249 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 GOSR1O95249 250 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 DUS4LO95620 317 aaKnown RBP3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 HPRP00739 348 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 SFTPBP07988 381 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 SKILP12757 684 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 OXTRP30559 389 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 CRYBA2P53672 197 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 NME5P56597 212 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 NPRL3Q12980 569 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 GPR50Q13585 617 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 MTF1Q14872 753 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 C3AR1Q16581 482 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 ECSCRQ19T08 205 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 AARDQ4LEZ3 155 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZNF613Q6PF04 617 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 CYP4V2Q6ZWL3 525 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 PRSS42Q7Z5A4 293 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 CATSPER3Q86XQ3 398 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 TDHQ8IZJ6 230 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 CCDC197Q8NCU1 140 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 SLC35C1Q96A29 364 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 ATXN7L3BQ96GX2 97 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 IWS1Q96ST2 819 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 DDX50Q9BQ39 737 aaKnown RBP3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 PINK1Q9BXM7 581 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 MRPL9Q9BYD2 267 aaKnown RBP3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 TSPYL1Q9H0U9 437 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 MID1IP1Q9NPA3 183 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZCCHC3Q9NUD5 404 aaKnown RBP3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 CWC25Q9NXE8 425 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 EXOC6BQ9Y2D4 811 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 AUP1Q9Y679 476 aa3.17□□□□□ -1.9
HMGB1P36-201ENST00000487709 TRIM64A6NGJ6 449 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 TRIM64BA6NI03 449 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 B4GAT1O43505 415 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ECE2O60344 883 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 LRCH4O75427 683 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 GMNNO75496 209 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZFAND5O76080 213 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 SERPINF2P08697 491 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 NT5C2P49902 561 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 SRPXP78539 464 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 CDKL1Q00532 357 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 RBBP4Q09028 425 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ELAVL2Q12926 359 aaKnown RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 TSTA3Q13630 321 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 PRAMEF8Q5VWM4 474 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 B3GLCTQ6Y288 498 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 Q6ZRP5 223 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 SH2D6Q7Z4S9 175 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 C17orf64Q86WR6 236 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 NAT8LQ8N9F0 302 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 LEMD2Q8NC56 503 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 C8orf46Q8TAG6 207 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 GOLGA5Q8TBA6 731 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ST7LQ8TDW4 575 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 LRRC15Q8TF66 581 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 SMPDL3AQ92484 453 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 KRT35Q92764 455 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 HAS2Q92819 552 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 CCDC47Q96A33 483 aaKnown RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZNF689Q96CS4 500 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 GAL3ST4Q96RP7 486 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 NAP1L3Q99457 506 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 SPAG8Q99932 426 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ATF6BQ99941 703 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 RBM4BQ9BQ04 359 aaKnown RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 PIGQQ9BRB3 760 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 LRRC61Q9BV99 259 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ACAT2Q9BWD1 397 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 UBXN6Q9BZV1 441 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZNF665Q9H7R5 613 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 MOB1AQ9H8S9 216 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 TMEM181Q9P2C4 612 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 FOXA2Q9Y261 457 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 SH3GLB1Q9Y371 365 aa3.16□□□□□ -1.9
HMGB1P36-201ENST00000487709 IGHV4-30-2A0A087WSY4 118 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 SMIM30A4D0T7 59 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC15A5A6NIM6 579 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 NPIPB9F8W1W9 429 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 PDHXO00330 501 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 OGTO15294 1046 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 KERAO60938 352 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ANGPTL1O95841 491 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 CT45A8P0DMV1 189 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 CT45A9P0DMV2 189 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 P4HA1P13674 534 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF10P21506 573 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 MARCKSP29966 332 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ATP6V1E1P36543 226 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 NSFP46459 744 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms