RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 FGF13Q92913 245 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 MCCC1Q96RQ3 725 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 DPH7Q9BTV6 452 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 GDE1Q9NZC3 331 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 CFL2Q9Y281 166 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 PCDHGA2Q9Y5H1 932 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 CENPXA8MT69 81 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 MT-ND2P03891 347 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 ASGR2P07307 311 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 IMPA1P29218 277 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 MMP12P39900 470 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 BIKQ13323 160 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 RAPSNQ13702 412 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF544Q6NX49 715 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 FAM46DQ8NEK8 389 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 MAN2B2Q9Y2E5 1009 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 A0A1B0GTL3 188 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 FXYD1O00168 92 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 GTPBP1O00178 669 aaKnown RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 AXIN1O15169 862 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 OR12D1P0DN82 309 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 ALPPL2P10696 532 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 RHCEP18577 417 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 HRH2P25021 359 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 GTF2E2P29084 291 aaKnown RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 PCGF2P35227 344 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 LGALS3BPQ08380 585 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 EIF4EBP2Q13542 120 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 TMEM44Q2T9K0 475 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 NHSL2Q5HYW2 709 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 LCTLQ6UWM7 567 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF551Q7Z340 670 aaPredicted RBP11.31□□□□□ -0.6
TRA2B-214ENST00000487615 VN1R5Q7Z5H4 357 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 CCDC116Q8IYX3 515 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 OR2L2Q8NH16 312 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 HSPBAP1Q96EW2 488 aa11.31□□□□□ -0.6
TRA2B-214ENST00000487615 RNGTTO60942 597 aaKnown RBP11.3□□□□□ -0.6
TRA2B-214ENST00000487615 MAGP20916 626 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 HMBOX1Q6NT76 420 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 HTRA1Q92743 480 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 FOXJ1Q92949 421 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 C19orf43Q9BQ61 176 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 PELI2Q9HAT8 420 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 TRNAU1APQ9NX07 287 aaKnown RBP11.3□□□□□ -0.6
TRA2B-214ENST00000487615 STMN3Q9NZ72 180 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 RLFQ13129 1914 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 AP1G1O43747 822 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 ALPLP05186 524 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 DRD2P14416 443 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 SLC6A11P48066 632 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 SMSP52788 366 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 SELENOWP63302 87 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 TUBA1BP68363 451 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 ST3GAL3Q11203 375 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 SLAMF1Q13291 335 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 TMEM35AQ53FP2 167 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 TCEAL5Q5H9L2 206 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 IRAK1BP1Q5VVH5 260 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 TUBA1AQ71U36 451 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 CLIP4Q8N3C7 705 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 CNPPD1Q9BV87 410 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 STOML2Q9UJZ1 356 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 PCDHGA8Q9Y5G5 932 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 TRBV5-4A0A0C4DH59 114 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 WASH3PC4AMC7 463 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 SLCO2B1O94956 709 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 RYKP34925 604 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 GPR68Q15743 365 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 PYDC2Q56P42 97 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 RNF44Q7L0R7 432 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 PLPP6Q8IY26 295 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 MOAP1Q96BY2 351 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 FCRL4Q96PJ5 515 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 ANKHQ9HCJ1 492 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 PAK6Q9NQU5 681 aaPredicted RBP11.3□□□□□ -0.6
TRA2B-214ENST00000487615 LYARQ9NX58 379 aaKnown RBP11.3□□□□□ -0.6
TRA2B-214ENST00000487615 RNF6Q9Y252 685 aa11.3□□□□□ -0.6
TRA2B-214ENST00000487615 MYL9P24844 172 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 MAP2K4P45985 399 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 VBP1P61758 197 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 DLEU7Q6UYE1 221 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF765Q7L2R6 523 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ZSWIM9Q86XI8 627 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 OR8J2Q8NGG1 315 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 BBS10Q8TAM1 723 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF671Q8TAW3 534 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 SPPL3Q8TCT6 385 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 HCAR2Q8TDS4 363 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 UBASH3BQ8TF42 649 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FAR1Q8WVX9 515 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 NPLQ9BXD5 320 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 SLC17A9Q9BYT1 436 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ASIC5Q9NY37 505 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FAM170BA6NMN3 283 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms