RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ZZZ3Q8IYH5 903 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 FAM109AQ8N4B1 249 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 GPATCH11Q8N954 259 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 FAM47BQ8NA70 645 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 FAM173AQ9BQD7 235 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 LIME1Q9H400 295 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 ZNF358Q9NW07 568 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 ST6GALNAC2Q9UJ37 374 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 KCNE2Q9Y6J6 123 aa18.03■□□□□ 0.48
SMPDL3A-202ENST00000487215 ZNF407Q9C0G0 2248 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 A0A1B0GVC2 190 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 ERI3O43414 337 aaKnown RBP18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 BANF1O75531 89 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 HNRNPH1P31943 449 aaKnown RBP18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 ADH7P40394 386 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 PPP2R2AP63151 447 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 BMPR2Q13873 1038 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 ELAVL1Q15717 326 aaKnown RBP18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 CCDC137Q6PK04 289 aaKnown RBP18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 HSDL2Q6YN16 418 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 RTL4Q6ZR62 310 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 GALNT7Q86SF2 657 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 PPIL6Q8IXY8 311 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 MMP21Q8N119 569 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 TMEM132CQ8N3T6 1108 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 MS4A6EQ96DS6 147 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 SCYL1Q96KG9 808 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 POLDIP3Q9BY77 421 aaKnown RBP18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 IL1RL2Q9HB29 575 aa18.02■□□□□ 0.48
SMPDL3A-202ENST00000487215 AQP7O14520 342 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 TTC4O95801 387 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 CELA3AP09093 270 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 CNR1P21554 472 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 HK2P52789 917 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 SNTB1Q13884 538 aaKnown RBP18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 CEBPEQ15744 281 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 CYP1B1Q16678 543 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 SPANXN3Q5MJ09 141 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 RNASEH2BQ5TBB1 312 aaKnown RBP18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 ARSKQ6UWY0 536 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 ZNF595Q8IYB9 648 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 KLHDC8AQ8IYD2 350 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 CERS2Q96G23 380 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 PDLIM5Q96HC4 596 aaKnown RBP18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 MS4A14Q96JA4 679 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 QRFPRQ96P65 431 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 CSF3RQ99062 836 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 GPATCH1Q9BRR8 931 aaKnown RBP18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 MRPS33Q9Y291 106 aaKnown RBP18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 VWA7Q9Y334 891 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 CLCA3PQ9Y6N3 262 aa18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 PRRC2AP48634 2157 aaKnown RBP18.01■□□□□ 0.47
SMPDL3A-202ENST00000487215 DNHD1Q96M86 4753 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 MYOCOSA0A1B0GUC4 107 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 LRIT2A6NDA9 550 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 B3GALT2O43825 422 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 ZNF354AO60765 605 aaPredicted RBP18■□□□□ 0.47
SMPDL3A-202ENST00000487215 WDR1O75083 606 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 IFNA16P05015 189 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 DNASE1L1P49184 302 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 FOXO1Q12778 655 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 FOXD4Q12950 439 aaPredicted RBP18■□□□□ 0.47
SMPDL3A-202ENST00000487215 SLC25A35Q3KQZ1 300 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 C1orf185Q5T7R7 199 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 TEDDM1Q5T9Z0 273 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 FAM45BPQ6NSW5 357 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 FAM47EQ6ZV65 393 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 RASGEF1CQ8N431 466 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 ZNF321PQ8N8H1 164 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 GOLM1Q8NBJ4 401 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 FAM45AQ8TCE6 357 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 CCT6BQ92526 530 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 NAP1L3Q99457 506 aaPredicted RBP18■□□□□ 0.47
SMPDL3A-202ENST00000487215 CLEC4MQ9H2X3 399 aaPredicted RBP18■□□□□ 0.47
SMPDL3A-202ENST00000487215 ACAD8Q9UKU7 415 aa18■□□□□ 0.47
SMPDL3A-202ENST00000487215 CORO1CQ9ULV4 474 aaPredicted RBP18■□□□□ 0.47
SMPDL3A-202ENST00000487215 A0A088AWK7 358 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 ATP6AP2A0A1C7CYW4 349 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 SYNDIG1LA6NDD5 238 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 NPEPPSL1A6NEC2 478 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 CDC7O00311 574 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 CYR61O00622 381 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 SUSD5O60279 629 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 ATP6AP2O75787 350 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 C1GALT1C1LP0DN25 315 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 ZNF10P21506 573 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 MAN2A2P49641 1150 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 PLA2G16P53816 162 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 SLBPQ14493 270 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 HYAL4Q2M3T9 481 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 MSS51Q4VC12 460 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 TMIGD1Q6UXZ0 262 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 SLCO4C1Q6ZQN7 724 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 WDR53Q7Z5U6 358 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 IGDCC3Q8IVU1 814 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 LRRC8AQ8IWT6 810 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 MORN4Q8NDC4 146 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 TTLQ8NG68 377 aa17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 PTPMT1Q8WUK0 201 aaPredicted RBP17.99■□□□□ 0.47
SMPDL3A-202ENST00000487215 DAZLQ92904 295 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms