RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	TMCO5B	A8MYB1	307 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ANKRD66	B4E2M5	251 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GPR89A	B7ZAQ6	455 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CHUK	O15111	745 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	KPNA5	O15131	536 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	INPP4B	O15327	924 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CREG1	O75629	220 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CLDN7	O95471	211 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	MT-ND3	P03897	115 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ATP1A1	P05023	1023 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GPR89B	P0CG08	455 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FGF5	P12034	268 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ACP5	P13686	325 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	AMD1	P17707	334 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CA4	P22748	312 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	IL4R	P24394	825 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CCNC	P24863	283 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	DLST	P36957	453 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GARS	P41250	739 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PRKCI	P41743	596 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SPINT3	P49223	89 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RASSF2	P50749	326 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PMS2	P54278	862 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	MLLT10	P55197	1068 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SELENOV	P59797	346 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	UBE2I	P63279	158 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ROR2	Q01974	943 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	MYL5	Q02045	173 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FOXM1	Q08050	763 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GALNT2	Q10471	571 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	NFATC2	Q13469	925 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PIGH	Q14442	188 aa	Predicted RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	IHH	Q14623	411 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GLE1	Q53GS7	698 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FAM76B	Q5HYJ3	339 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CCDC122	Q5T0U0	273 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	LCE1F	Q5T754	118 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	HENMT1	Q5T8I9	393 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ATP1A1-AS1	Q5TC04	95 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CYB5D1	Q6P9G0	228 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	LRIG3	Q6UXM1	1119 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GSG1L	Q6UXU4	331 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RBM43	Q6ZSC3	357 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TMEM26	Q6ZUK4	368 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ASB18	Q6ZVZ8	466 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	APTX	Q7Z2E3	356 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ZNF571	Q7Z3V5	609 aa	Predicted RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	MDGA2	Q7Z553	956 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ZGRF1	Q86YA3	2104 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	APLF	Q8IW19	511 aa	Predicted RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ARRDC2	Q8TBH0	407 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FAM71B	Q8TC56	605 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ZNF653	Q96CK0	615 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	C9orf72	Q96LT7	481 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TSGA13	Q96PP4	275 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SMIM14	Q96QK8	99 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TBC1D10A	Q9BXI6	508 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TDRD1	Q9BXT4	1180 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ULBP3	Q9BZM4	244 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TRIM7	Q9C029	511 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	POLR1E	Q9GZS1	481 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RAB33B	Q9H082	229 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CARD9	Q9H257	536 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	HSD3B7	Q9H2F3	369 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	HAUS4	Q9H6D7	363 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	KCNK9	Q9NPC2	374 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	HAUS2	Q9NVX0	235 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ANO10	Q9NW15	660 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RBM22	Q9NW64	420 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PKD2L2	Q9NZM6	624 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	AIPL1	Q9NZN9	384 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CHMP5	Q9NZZ3	219 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RCOR3	Q9P2K3	495 aa	Predicted RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ATXN10	Q9UBB4	475 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	MYO1A	Q9UBC5	1043 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	EPHA6	Q9UF33	1036 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PADI1	Q9ULC6	663 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	KCNK6	Q9Y257	313 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CHKB	Q9Y259	395 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TP53TG5	Q9Y2B4	290 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	MRPS18B	Q9Y676	258 aa	Known RBP	3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SVIL	O95425	2214 aa		3.84	□□□□□ -1.79
SNRNP40-205	ENST00000486941	NBPF19	A0A087WUL8	3843 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	C1orf232	A0A0U1RR37	186 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	LRRC53	A6NM62	1247 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	C21orf140	B9A014	251 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941		K7EM74	188 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KMO	O15229	486 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KCNJ13	O60928	360 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	SPAG6	O75602	509 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KIAA0754	O94854	1291 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZNF432	O94892	652 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	SLC25A14	O95258	325 aa	Predicted RBP	3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	VIP	P01282	170 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KRT7	P08729	469 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TCF4	P15884	667 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZNF12	P17014	697 aa		3.83	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZNF7	P17097	686 aa	Predicted RBP	3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms