RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CALCOCO2Q13137 446 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
HDAC6-227ENST00000485102 RUNX2Q13950 521 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 ELAVL1Q15717 326 aaKnown RBP12.09□□□□□ -0.47
HDAC6-227ENST00000485102 XKR6Q5GH73 641 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
HDAC6-227ENST00000485102 SLC22A16Q86VW1 577 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 CCDC71Q8IV32 467 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-227ENST00000485102 KLHDC8AQ8IYD2 350 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 TMEM132CQ8N3T6 1108 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 GOLM1Q8NBJ4 401 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 OR8K3Q8NH51 312 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 NCLNQ969V3 563 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 MS4A6EQ96DS6 147 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 SGCZQ96LD1 299 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 TTYH2Q9BSA4 534 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 DEFB127Q9H1M4 99 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 NT5DC2Q9H857 520 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 PRTFDC1Q9NRG1 225 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 HPF1Q9NWY4 346 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 KCMF1Q9P0J7 381 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 ASIC3Q9UHC3 531 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 ERVK-11Q9UQG0 969 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 SLC22A14Q9Y267 594 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 DYRK1BQ9Y463 629 aa12.09□□□□□ -0.47
HDAC6-227ENST00000485102 A0A088AWK7 358 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 PINLYPA6NC86 204 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 LRIT2A6NDA9 550 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 FIGNL2A6NMB9 653 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 NPIPA2E9PIF3 369 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 NPIPA3F8WFD2 350 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 TGFBR3LH3BV60 316 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 PRKNO60260 465 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 SUSD5O60279 629 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 CTNSO60931 367 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 CTAG2O75638 210 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 OR2J2O76002 312 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 PDE9AO76083 593 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 GUCA1CO95843 209 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 CD99P14209 185 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 ZNF10P21506 573 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 CNR1P21554 472 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 HPDP32754 393 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 ZFP36L2P47974 494 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 NR0B1P51843 470 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 IST1P53990 364 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 RAB38P57729 211 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 BTN3A2P78410 334 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 FOLH1Q04609 750 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 RBBP5Q15291 538 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 ADPRMQ3LIE5 342 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 TOR1AIP1Q5JTV8 583 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 HECTD2Q5U5R9 776 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 FAM45BPQ6NSW5 357 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 C8orf74Q6P047 294 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 B3GNT6Q6ZMB0 384 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 SLCO4C1Q6ZQN7 724 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 GK5Q6ZS86 529 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 TMPRSS11BQ86T26 416 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 KLHL7Q8IXQ5 586 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 MORN4Q8NDC4 146 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 C7orf57Q8NEG2 295 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 OR5M3Q8NGP4 307 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 ASB15Q8WXK1 588 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 DAZLQ92904 295 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 CERS2Q96G23 380 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 FAR2Q96K12 515 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 QRFPRQ96P65 431 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 RASL10BQ96S79 203 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 TTTY12Q9BZ98 90 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 DDX47Q9H0S4 455 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 RHBGQ9H310 441 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 PNO1Q9NRX1 252 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 PNPLA3Q9NST1 481 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 VTI1BQ9UEU0 232 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 MRPS33Q9Y291 106 aaKnown RBP12.08□□□□□ -0.48
HDAC6-227ENST00000485102 L3MBTL1Q9Y468 752 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.48
HDAC6-227ENST00000485102 FAM47E-STBD1D6RA91 191 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 CYR61O00622 381 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 AQP7O14520 342 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 WDR1O75083 606 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 CLEC3AO75596 197 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 OR6B1O95007 311 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 TBX6O95947 436 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-227ENST00000485102 C1GALT1C1LP0DN25 315 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 GLI4P10075 376 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 ZNF37AP17032 561 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-227ENST00000485102 GNAZP19086 355 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 PEX19P40855 299 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 DLX5P56178 289 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 FOXO1Q12778 655 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 RCN2Q14257 317 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 FRG1Q14331 258 aaKnown RBP12.07□□□□□ -0.48
HDAC6-227ENST00000485102 MORF4L2Q15014 288 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms