RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 C10orf62Q5T681 223 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 CPEB2Q7Z5Q1 589 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 EXOC3L1Q86VI1 746 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 SCUBE1Q8IWY4 988 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 PARP9Q8IXQ6 854 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 ZNF843Q8N446 348 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 ADAMTS18Q8TE60 1221 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 SELENOMQ8WWX9 145 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 PTCHD1Q96NR3 888 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 KCNA7Q96RP8 456 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 HBEGFQ99075 208 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 SERPINI1Q99574 410 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 WDR77Q9BQA1 342 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 MECRQ9BV79 373 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 MRPL1Q9BYD6 325 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 SLC29A3Q9BZD2 475 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 CENPHQ9H3R5 247 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 LYRM4Q9HD34 91 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 TNFRSF12AQ9NP84 129 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 MID1IP1Q9NPA3 183 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 NECTIN3Q9NQS3 549 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 RIC8BQ9NVN3 520 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 GPR83Q9NYM4 423 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 SNX6Q9UNH7 406 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 STK38LQ9Y2H1 464 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 CLDN16Q9Y5I7 305 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 EIF4E1BA6NMX2 242 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 TMPRSS11DO60235 418 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 SEC24DO94855 1032 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 SEMA3DO95025 777 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 ESRRBO95718 433 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 PRR35P0CG20 571 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 ITGA3P26006 1051 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 ETV4P43268 484 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 HTR6P50406 440 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 PGDP52209 483 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 ARFIP1P53367 373 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 FOXA1P55317 472 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 NAA20P61599 178 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 SLAMF1Q13291 335 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 MYBPC3Q14896 1274 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 SFT2D3Q587I9 215 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 CFAP157Q5JU67 520 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 VWA5B1Q5TIE3 1220 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 ASB18Q6ZVZ8 466 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 ZCCHC7Q8N3Z6 543 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 METTL6Q8TCB7 284 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 PGM2Q96G03 612 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 THOC3Q96J01 351 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 SMAD5Q99717 465 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 GATA5Q9BWX5 397 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 ZNF552Q9H707 407 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 DDX31Q9H8H2 851 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 FBXW2Q9UKT8 454 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 TIMM22Q9Y584 194 aa12.75□□□□□ -0.37
SOX2-OT-209ENST00000485035 SEC16AO15027 2179 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 A0A0A6YYD5 115 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 TRIM13O60858 407 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 KRT6AP02538 564 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 GBAP04062 536 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 KRT6BP04259 564 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 ENO1P06733 434 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 HMOX2P30519 316 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 KRT6CP48668 564 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 HNRNPH2P55795 449 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 HSD17B7P56937 341 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 OR4D2P58180 307 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 MRM1Q6IN84 353 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 PAPD4Q6PIY7 484 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 CLNKQ7Z7G1 428 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 CROCCP2Q86T23 111 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 PTRH1Q86Y79 214 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 ZNF595Q8IYB9 648 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 SHCBP1LQ9BZQ2 653 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 LHPPQ9H008 270 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 BRF2Q9HAW0 419 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 SSU72Q9NP77 194 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 PRTFDC1Q9NRG1 225 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 SLC12A4Q9UP95 1085 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 ATG4BQ9Y4P1 393 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 MMACHCQ9Y4U1 282 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 FAM208BQ5VWN6 2430 aa12.74□□□□□ -0.37
SOX2-OT-209ENST00000485035 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 BSNQ9UPA5 3926 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 ULK1O75385 1050 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 PRKRAO75569 313 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 SERPINA7P05543 415 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 ITGAMP11215 1152 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 CHN1P15882 459 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 CPN2P22792 545 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 TPP2P29144 1249 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 PPP2R1BP30154 601 aa12.73□□□□□ -0.37
SOX2-OT-209ENST00000485035 GALNT1Q10472 559 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms