RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SSTR2P30874 369 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 PTGER1P34995 402 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 HSF1Q00613 529 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 DOC2AQ14183 400 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 EFTUD2Q15029 972 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■□□□ 14.4
SCFD1-206ENST00000484733 CDSNQ15517 529 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 ZKSCAN8Q15776 578 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-206ENST00000484733 SRFBP1Q8NEF9 429 aaKnown RBP10.67□□□□□ -0.7
SCFD1-206ENST00000484733 OR8K3Q8NH51 312 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 CCT6BQ92526 530 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 C14orf79Q96F83 325 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 UBXN10Q96LJ8 280 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 KRT12Q99456 494 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 PHACTR1Q9C0D0 580 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 KCMF1Q9P0J7 381 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 VTI1BQ9UEU0 232 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 CREBBPQ92793 2442 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 A0A0G2JN53 185 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 CXorf49A8MYA2 514 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 C19orf84I3L1E1 186 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 TFECO14948 347 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 C1QAP02745 245 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 STMN1P16949 149 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 PTGS2P35354 604 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 GP5P40197 560 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 GTF3C1Q12789 2109 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 SLC13A2Q13183 592 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 OR4D1Q15615 310 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 PDK4Q16654 411 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 HIST2H2ACQ16777 129 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 CMPK2Q5EBM0 449 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 PAGE2BQ5JRK9 111 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 HIST2H2AA3Q6FI13 130 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 TMEM211Q6ICI0 200 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 LRRC70Q7Z2Q7 622 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 OR14A16Q8NHC5 309 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 DAZLQ92904 295 aaKnown RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 ERP44Q9BS26 406 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 TBCDQ9BTW9 1192 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 ENKD1Q9H0I2 346 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 COPS7BQ9H9Q2 264 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 NCF1BA6NI72 391 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 NCF1CA8MVU1 366 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 PRKNO60260 465 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 SCELO95171 688 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 NCF1P14598 390 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 SERPINB1P30740 379 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 SSTR1P30872 391 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 KIR3DL1P43629 444 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 HSPA7P48741 367 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 PLA2G16P53816 162 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 SERTAD2Q14140 314 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 TMEM35AQ53FP2 167 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 XKR6Q5GH73 641 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 GRTP1Q5TC63 336 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 RGS9BPQ6ZS82 235 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 MDGA2Q7Z553 956 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 SNX31Q8N9S9 440 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 FAM47BQ8NA70 645 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 PTPMT1Q8WUK0 201 aaPredicted RBP10.66□□□□□ -0.7
SCFD1-206ENST00000484733 UBE2E3Q969T4 207 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 CD244Q9BZW8 370 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 CAB39LQ9H9S4 337 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 SAYSD1Q9NPB0 183 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 TXNDC16Q9P2K2 825 aa10.66□□□□□ -0.7
SCFD1-206ENST00000484733 A0A1B0GTH9 108 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 TUBB4AP04350 444 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 EPORP19235 508 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 CD22P20273 847 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 CERS1P27544 350 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 PPP2R1BP30154 601 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 KCNC1P48547 511 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 RAB10P61026 200 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 CALCOCO2Q13137 446 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 PAOXQ6QHF9 649 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 MAATS1Q7Z4T9 603 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 UBE3DQ7Z6J8 389 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 LAS2Q8IYD9 372 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 SPATA6LQ8N4H0 392 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 UBTD2Q8WUN7 234 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 KCNC2Q96PR1 638 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 F2RL3Q96RI0 385 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 MS4A8Q9BY19 250 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 ALOXE3Q9BYJ1 711 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 CD274Q9NZQ7 290 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 MYOTQ9UBF9 498 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 CLCA3PQ9Y6N3 262 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 CENPEQ02224 2701 aa10.65□□□□□ -0.7
SCFD1-206ENST00000484733 TCRBV9S1A1TA0A576 114 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 A8MVJ9 347 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 PHGDHO43175 533 aaKnown RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 S100BP04271 92 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 SNRPB2P08579 225 aaKnown RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 CAPN3P20807 821 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 ATP5A1P25705 553 aaKnown RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 SPRP35270 261 aaPredicted RBP10.64□□□□□ -0.71
SCFD1-206ENST00000484733 IRF8Q02556 426 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 BIKQ13323 160 aa10.64□□□□□ -0.71
SCFD1-206ENST00000484733 BMPR2Q13873 1038 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms