RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 DEFB126Q9BYW3 111 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 VPS11Q9H270 941 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 CDC42EP4Q9H3Q1 356 aaKnown RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 NT5DC2Q9H857 520 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 LIN28AQ9H9Z2 209 aaKnown RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 CPSF2Q9P2I0 782 aaKnown RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 ZNF223Q9UK11 482 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 DAPP1Q9UN19 280 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 NPIPA1Q9UND3 350 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 MRPS33Q9Y291 106 aaKnown RBP9.78□□□□□ -0.84
CPSF4-212ENST00000482251 ACOT9Q9Y305 439 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 MMACHCQ9Y4U1 282 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 ANGPTL3Q9Y5C1 460 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 CLDN16Q9Y5I7 305 aa9.78□□□□□ -0.84
CPSF4-212ENST00000482251 A0A096LPK6 155 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 CYR61O00622 381 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 CLDN4O14493 209 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 FCHO1O14526 889 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 PRKRAO75569 313 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ALDOAP04075 364 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 SP1P08047 785 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 MTHFD2P13995 350 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 PHBP35232 272 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ARL1P40616 181 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 SSR2P43308 183 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 PIK3CGP48736 1102 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 CYB561P49447 251 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 CLCN2P51788 898 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 MLF1P58340 268 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 GPR85P60893 370 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ALDH6A1Q02252 535 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 TGM3Q08188 693 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 LAPTM5Q13571 262 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ZRSR2Q15696 482 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 WHAMMP3Q1A5X7 153 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 FAM83EQ2M2I3 478 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 MED27Q6P2C8 311 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 UBE3DQ7Z6J8 389 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ZNF227Q86WZ6 799 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 LGI4Q8N135 537 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 DNAJB8Q8NHS0 232 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ADAMTS18Q8TE60 1221 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ZNF473Q8WTR7 871 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 IFT81Q8WYA0 676 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 SEC16BQ96JE7 1060 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 MAGED4Q96JG8 741 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 KCNC2Q96PR1 638 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 MTERF1Q99551 399 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 NPLQ9BXD5 320 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 PITHD1Q9GZP4 211 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 OR51B5Q9H339 312 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ACSS3Q9H6R3 686 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 CLK4Q9HAZ1 481 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ADAP2Q9NPF8 381 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 PRDM7Q9NQW5 492 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 ZNF358Q9NW07 568 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 MTRF1LQ9UGC7 380 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 DMGDHQ9UI17 866 aaKnown RBP9.77□□□□□ -0.85
CPSF4-212ENST00000482251 TINAGQ9UJW2 476 aa9.77□□□□□ -0.85
CPSF4-212ENST00000482251 A0A1B0GUH1 482 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 SYCE1LA8MT33 242 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 CCL21O00585 134 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 NME2P1O60361 137 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 SLC19A2O60779 497 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ITGA10O75578 1167 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 SIX3O95343 332 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-212ENST00000482251 INHBAP08476 426 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 EPB42P16452 691 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ZNF24P17028 368 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 NME2P22392 152 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ATP5A1P25705 553 aaKnown RBP9.76□□□□□ -0.85
CPSF4-212ENST00000482251 TYK2P29597 1187 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 HPDP32754 393 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-212ENST00000482251 RAP1GDS1P52306 607 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 HSD17B7P56937 341 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 STX4Q12846 297 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 NAA30Q147X3 362 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-212ENST00000482251 SETDB1Q15047 1291 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 TBCCQ15814 346 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 C3AR1Q16581 482 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 FAM219BQ5XKK7 198 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 GRHL2Q6ISB3 625 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 SLC25A25Q6KCM7 469 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 KLC3Q6P597 504 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 NCCRP1Q6ZVX7 275 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-212ENST00000482251 GOLGA7Q7Z5G4 137 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 OR4N5Q8IXE1 308 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ZNF595Q8IYB9 648 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 LAS2Q8IYD9 372 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 CYP4Z2PQ8N1L4 340 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 PLD6Q8N2A8 252 aaKnown RBP9.76□□□□□ -0.85
CPSF4-212ENST00000482251 TMEM156Q8N614 296 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 HORMAD2Q8N7B1 307 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ZNF321PQ8N8H1 164 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ACOT4Q8N9L9 421 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 FAM98AQ8NCA5 519 aaKnown RBP9.76□□□□□ -0.85
CPSF4-212ENST00000482251 OR7G3Q8NG95 312 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 HUS1BQ8NHY5 278 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 DOK4Q8TEW6 326 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 TMEM125Q96AQ2 219 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms