RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 HTR3DQ70Z44 454 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 BCDIN3DQ7Z5W3 292 aaKnown RBP12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 NOXA1Q86UR1 476 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 TMC8Q8IU68 726 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 SLC44A2Q8IWA5 706 aaPredicted RBP12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 L3MBTL4Q8NA19 623 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CSGALNACT1Q8TDX6 532 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 SLC12A9Q9BXP2 914 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 RERGLQ9H628 205 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CRNNQ9UBG3 495 aaPredicted RBP12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CARD8Q9Y2G2 431 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 COL4A6Q14031 1691 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 SGTAO43765 313 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 SLC6A12P48065 614 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 SPINT3P49223 89 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 GGTA1PQ4G0N0 100 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 PLAG1Q6DJT9 500 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 C22orf39Q6P5X5 142 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 PAMR1Q6UXH9 720 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 Q6ZVL8 140 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 HSD11B1LQ7Z5J1 315 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 DEPDC4Q8N2C3 294 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 OR4K1Q8NGD4 311 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 SETD6Q8TBK2 473 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 ECHDC3Q96DC8 303 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 TCEAL4Q96EI5 215 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 C11orf54Q9H0W9 315 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 IRF2BPLQ9H1B7 796 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 C3orf14Q9HBI5 128 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 ACSL6Q9UKU0 697 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 HCFC2Q9Y5Z7 792 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 ENTPD6O75354 484 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 LATS1O95835 1130 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 GASTP01350 101 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 CYP17A1P05093 508 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 ANXA8P13928 327 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 CHMP24386 653 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 MVDP53602 400 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 GNG2P59768 71 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 PFN3P60673 137 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 PSPHP78330 225 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 GPAT3Q53EU6 434 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 METTL2BQ6P1Q9 378 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 PTCHD4Q6ZW05 846 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 ABI3BPQ7Z7G0 1075 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 GLCCI1Q86VQ1 547 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 FAM9CQ8IZT9 166 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 ZNF366Q8N895 744 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 UBASH3BQ8TF42 649 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 JPH3Q8WXH2 748 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 LYSMD1Q96S90 227 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 ACER3Q9NUN7 267 aa12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 LSM7Q9UK45 103 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-208ENST00000479530 LRRTM2O43300 516 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CCNB2O95067 398 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CLEC2LP0C7M8 214 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 PCGF2P35227 344 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 ETV3P41162 512 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CRYBB2P43320 205 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 PREPP48147 710 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CSNK1DP48730 415 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 SNRPD1P62314 119 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 TIMM50Q3ZCQ8 353 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 MPPE1Q53F39 396 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 LYPLAL1Q5VWZ2 237 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 TMEM215Q68D42 235 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 LRRC70Q7Z2Q7 622 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 AQP11Q8NBQ7 271 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 C11orf65Q8NCR3 313 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 ABCB9Q9NP78 766 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 C11orf16Q9NQ32 467 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 RPRD1BQ9NQG5 326 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 VPS29Q9UBQ0 182 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 SCN8AQ9UQD0 1980 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 PRAMEF33A0A0G2JMD5 474 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 B4DXG7 233 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 NEDD8-MDP1E9PL57 170 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 PLD2O14939 933 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 SCAMP2O15127 329 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 PRAMEF10O60809 474 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CPNE3O75131 537 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 ENDOUP21128 410 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 ITGB8P26012 769 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 WEE1P30291 646 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 RAE1P78406 368 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CEP78Q5JTW2 689 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 USP45Q70EL2 814 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 GPR156Q8NFN8 814 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 NFKBIDQ8NI38 313 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 ZNF296Q8WUU4 475 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 FCRL1Q96LA6 429 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 CITED4Q96RK1 184 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms