RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 STAB1Q9NY15 2570 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 TMEM131Q92545 1883 aa4.3□□□□□ -1.72
VPS50-214ENST00000477935 TACC2O95359 2948 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ZCWPW2A0A1B0GU75 182 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 NTN3O00634 580 aaPredicted RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 ANKRD28O15084 1053 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 RNASEH2AO75792 299 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 EIF2S1P05198 315 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 OR52Z1P0C646 297 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ZDHHC11BP0C7U3 371 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 CD1EP15812 388 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 GOT1P17174 413 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 TCEA1P23193 301 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 ANOS1P23352 680 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 BDNFP23560 247 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ACAT1P24752 427 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 PSMA4P25789 261 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 ATP5C1P36542 298 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 MRPS34P82930 218 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 COG7P83436 770 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 RUNX1T1Q06455 604 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 CDC16Q13042 620 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 NECTIN1Q15223 517 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 MED22Q15528 200 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 CDKN3Q16667 212 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 PNLIPRP3Q17RR3 467 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 KRTCAP3Q53RY4 240 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ZNF805Q5CZA5 627 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 SIRPB2Q5JXA9 342 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 PDSS1Q5T2R2 415 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 LCN10Q6JVE6 187 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ZNF704Q6ZNC4 412 aaPredicted RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 SLC26A9Q7LBE3 791 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ZFAND4Q86XD8 727 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 LRRC52Q8N7C0 313 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ARHGEF2Q92974 986 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 FBXO32Q969P5 355 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 SLC45A3Q96JT2 553 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 ZNF583Q96ND8 569 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 MAGIXQ9H6Y5 334 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 EPB41L5Q9HCM4 733 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 IL37Q9NZH6 218 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 AKAP7Q9P0M2 348 aaPredicted RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 UBA2Q9UBT2 640 aaPredicted RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 PISDQ9UG56 409 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 CPSF3Q9UKF6 684 aaKnown RBP4.29□□□□□ -1.72
VPS50-214ENST00000477935 SDK2Q58EX2 2172 aa4.29□□□□□ -1.72
VPS50-214ENST00000477935 A0A1W2PP11 408 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 FAM92AA1XBS5 289 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 CTAGE9A4FU28 777 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 TCP11X1B4DZS4 312 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 F8VP50 259 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 DVL1O14640 695 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 SLC16A4O15374 487 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 SLC7A4O43246 635 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 HCRTR2O43614 444 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 FAM189A1O60320 539 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 MED24O75448 989 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 SLC22A3O75751 556 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 LUC7L3O95232 432 aaKnown RBP4.28□□□□□ -1.72
VPS50-214ENST00000477935 CTAGE8P0CG41 777 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 RARGP13631 454 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 NFKBIAP25963 317 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 LIG4P49917 911 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 PDX1P52945 283 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 DVL1P1P54792 670 aaPredicted RBP4.28□□□□□ -1.72
VPS50-214ENST00000477935 TAS2R40P59535 323 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 PLIN5Q00G26 463 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 PDE1CQ14123 709 aaPredicted RBP4.28□□□□□ -1.72
VPS50-214ENST00000477935 KRT32Q14532 448 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 CST6Q15828 149 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 ZRANB3Q5FWF4 1079 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 LRIF1Q5T3J3 769 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 NSUN5P2Q63ZY6 315 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 HAUS3Q68CZ6 603 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 TMEM215Q68D42 235 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 GUSBP11Q6P575 273 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 GLDNQ6ZMI3 551 aaPredicted RBP4.28□□□□□ -1.72
VPS50-214ENST00000477935 C1orf122Q6ZSJ8 110 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 PXKQ7Z7A4 578 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 SDCCAG8Q86SQ7 713 aaPredicted RBP4.28□□□□□ -1.72
VPS50-214ENST00000477935 TRIM69Q86WT6 500 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 CTAGE4Q8IX94 777 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 FBXL16Q8N461 479 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 ZNF557Q8N988 423 aaPredicted RBP4.28□□□□□ -1.72
VPS50-214ENST00000477935 TMEM161BQ8NDZ6 487 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 OR6C4Q8NGE1 309 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 HM13Q8TCT9 377 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 MYLPFQ96A32 169 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 ALG14Q96F25 216 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 LINGO1Q96FE5 620 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 PCED1BQ96HM7 432 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 IL12RB2Q99665 862 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 CCDC3Q9BQI4 270 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 SYT15Q9BQS2 421 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 ELOVL4Q9GZR5 314 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 FBXO44Q9H4M3 255 aa4.28□□□□□ -1.72
VPS50-214ENST00000477935 POLD4Q9HCU8 107 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms