RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 NHSL2Q5HYW2 709 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC22A10Q63ZE4 541 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 OPN5Q6U736 354 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 HSDL2Q6YN16 418 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 C22orf34Q6ZV56 151 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 SH2D5Q6ZV89 423 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 CCDC50Q8IVM0 306 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 SCUBE1Q8IWY4 988 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 MFSD9Q8NBP5 474 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 ZPLD1Q8TCW7 415 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 PAQR8Q8TEZ7 354 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC44A1Q8WWI5 657 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 LRRC45Q96CN5 670 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 WDYHV1Q96HA8 205 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 PDLIM2Q96JY6 352 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 PANX2Q96RD6 677 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 ADAM19Q9H013 955 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 PIGMQ9H3S5 423 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 PNO1Q9NRX1 252 aaKnown RBP6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 FAM114A2Q9NRY5 505 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNHIT6Q9NWK9 470 aaKnown RBP6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 PSD3Q9NYI0 1048 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 CHMP5Q9NZZ3 219 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 MARCH4Q9P2E8 410 aaPredicted RBP6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 LPAR3Q9UBY5 353 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 RIMKLBQ9ULI2 386 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 SH2B3Q9UQQ2 575 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 HYOU1Q9Y4L1 999 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 MMACHCQ9Y4U1 282 aa6.7□□□□□ -1.34
SPTLC1-205ENST00000477888 APOC4-APOC2K7ER74 178 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 METTL18O95568 372 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 APOC2P02655 101 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 C1QAP02745 245 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 CATP04040 527 aaKnown RBP6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 PGRP06401 933 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC35G6P0C7Q6 338 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 TMEM253P0C7T8 217 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 TNNT1P13805 278 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 CHRM3P20309 590 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 COMTP21964 271 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC1A1P43005 524 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 TTPAP49638 278 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 SKP1P63208 163 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 KCNJ2P63252 427 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 PWP1Q13610 501 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 KCNJ11Q14654 390 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 PARP6Q2NL67 630 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 MSS51Q4VC12 460 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 ACSBG2Q5FVE4 666 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 CTSL3PQ5NE16 218 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 TSTD2Q5T7W7 516 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 THEMIS2Q5TEJ8 643 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 NIPAL1Q6NVV3 410 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 PLXDC2Q6UX71 529 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 BBS12Q6ZW61 710 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 BTLAQ7Z6A9 289 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 ADGRE4PQ86SQ3 457 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 LRRC6Q86X45 466 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 MEX3DQ86XN8 651 aaKnown RBP6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF611Q8N823 705 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 OR8K3Q8NH51 312 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC22A8Q8TCC7 542 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 CTNNBL1Q8WYA6 563 aaPredicted RBP6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 ZFP3Q96NJ6 502 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 BIRC8Q96P09 236 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 MED18Q9BUE0 208 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 NUP62CLQ9H1M0 184 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 SLCO5A1Q9H2Y9 848 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 ESRP2Q9H6T0 727 aaKnown RBP6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 LRRC40Q9H9A6 602 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 GALPQ9UBC7 116 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 TSR3Q9UJK0 312 aaKnown RBP6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 BOKQ9UMX3 212 aaPredicted RBP6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 CAMK2AQ9UQM7 478 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 KIAA1549Q9HCM3 1950 aa6.69□□□□□ -1.34
SPTLC1-205ENST00000477888 ROS1P08922 2347 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 A0A096LNT2 108 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 LRRC14BA6NHZ5 514 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 GFYI3L273 518 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 CD3EAPO15446 510 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 NDUFS4O43181 175 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 KLF4O43474 513 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 CEP104O60308 925 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ADAM11O75078 769 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 AVILO75366 819 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 TNFSF13O75888 250 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 STK10O94804 968 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 HPNP05981 417 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF888P0CJ79 500 aaPredicted RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 SMIM10L1P0DMW3 83 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 RNH1P13489 461 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 CTNNA2P26232 953 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 IMPA1P29218 277 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 CCKARP32238 428 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 UGT2B10P36537 528 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 ACVR1BP36896 505 aa6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 SKIV2L2P42285 1042 aaKnown RBP6.68□□□□□ -1.34
SPTLC1-205ENST00000477888 DIO3P55073 304 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms