RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 FRG2BQ96QU4 278 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 HBEGFQ99075 208 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 RHNO1Q9BSD3 238 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 TBCDQ9BTW9 1192 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SPON2Q9BUD6 331 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 CPEB1Q9BZB8 566 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 REXO4Q9GZR2 422 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 DCSTAMPQ9H295 470 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 ASB8Q9H765 288 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SLC25A19Q9HC21 320 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 MOV10Q9HCE1 1003 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 ABCB8Q9NUT2 735 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 EXD2Q9NVH0 621 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 THUMPD1Q9NXG2 353 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 FBXL12Q9NXK8 326 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 WWOXQ9NZC7 414 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 NDUFAF4Q9P032 175 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 WARS2Q9UGM6 360 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 SLCO3A1Q9UIG8 710 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 KCND3Q9UK17 655 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 RUVBL1Q9Y265 456 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 BTBD3Q9Y2F9 522 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 LSM2Q9Y333 95 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 ORC6Q9Y5N6 252 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 LYVE1Q9Y5Y7 322 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 DGKBQ9Y6T7 804 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 TRAV19A0A0A6YYK7 116 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 A0A1W2PQ67 120 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TSPAN11A1L157 253 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 EFCAB9A8MZ26 197 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 EVPLLA8MZ36 301 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 WASH3PC4AMC7 463 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 RNASET2O00584 256 aaKnown RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 NRG2O14511 850 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 RFXANKO14593 260 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 GNGT2O14610 69 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TBX19O60806 448 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 E2F6O75461 281 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 PSIP1O75475 530 aaKnown RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 MYO1DO94832 1006 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 AP2A2O94973 939 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 LCKP06239 509 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 CKMP06732 381 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 GSTT2P0CG29 244 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 GSTT2BP0CG30 244 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TRAPPC2P0DI81 140 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TRAPPC2BP0DI82 140 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 MYCLP1P12525 358 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 ANXA8P13928 327 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ENGP17813 658 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 SDHBP21912 280 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ITGB7P26010 798 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 CTSKP43235 329 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ALDH9A1P49189 494 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ARHGDIAP52565 204 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 MAPK10P53779 464 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 DCDC1P59894 354 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ZXDBP98169 803 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 EFNB1P98172 346 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 SEMG2Q02383 582 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 PPP1R8Q12972 351 aaKnown RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 KRR1Q13601 381 aaKnown RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 SIM2Q14190 667 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 RGNQ15493 299 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 NDUFA5Q16718 116 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ITPRIPL2Q3MIP1 535 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 SLC25A30Q5SVS4 291 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TMEM236Q5W0B7 351 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 STEAP3Q658P3 488 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TMEM53Q6P2H8 277 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 CRTC1Q6UUV9 634 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 HTR3DQ70Z44 454 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 GDPD3Q7L5L3 318 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TAS2R42Q7RTR8 314 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ZNF438Q7Z4V0 828 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 DENND1CQ8IV53 801 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 RAVER1Q8IY67 606 aaKnown RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 LAS2Q8IYD9 372 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 LRRC56Q8IYG6 542 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 MAML2Q8IZL2 1156 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 CMTM8Q8IZV2 173 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 SPEM1Q8N4L4 309 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 CLDN19Q8N6F1 224 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ZBTB44Q8NCP5 570 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 GPR26Q8NDV2 337 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 SETD6Q8TBK2 473 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 SELENOMQ8WWX9 145 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 UBE2FQ969M7 185 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ZNF764Q96H86 408 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 COL21A1Q96P44 957 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 FUZQ9BT04 418 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 DOHHQ9BU89 302 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TRAF4Q9BUZ4 470 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 CCDC32Q9BV29 185 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 GPR63Q9BZJ6 419 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 RACGAP1Q9H0H5 632 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 LMAN1LQ9HAT1 526 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 TPT1P8Q9HAU6 139 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 C3orf14Q9HBI5 128 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms