RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 TGIF2LYQ8IUE0 185 aa18.93■□□□□ 0.62
APP-215ENST00000474136 DMRTC2Q8IXT2 367 aaPredicted RBP18.93■□□□□ 0.62
APP-215ENST00000474136 EID3Q8N140 333 aa18.93■□□□□ 0.62
APP-215ENST00000474136 SLC5A8Q8N695 610 aa18.93■□□□□ 0.62
APP-215ENST00000474136 HORMAD2Q8N7B1 307 aa18.93■□□□□ 0.62
APP-215ENST00000474136 FAM57AQ8TBR7 257 aa18.93■□□□□ 0.62
APP-215ENST00000474136 PKP4Q99569 1192 aa18.93■□□□□ 0.62
APP-215ENST00000474136 DERL2Q9GZP9 239 aa18.93■□□□□ 0.62
APP-215ENST00000474136 GSX1Q9H4S2 264 aaPredicted RBP18.93■□□□□ 0.62
APP-215ENST00000474136 FAM53CQ9NYF3 392 aa18.93■□□□□ 0.62
APP-215ENST00000474136 NKIRAS1Q9NYS0 192 aa18.93■□□□□ 0.62
APP-215ENST00000474136 RNF6Q9Y252 685 aa18.93■□□□□ 0.62
APP-215ENST00000474136 HEATR5BQ9P2D3 2071 aa18.93■□□□□ 0.62
APP-215ENST00000474136 MAP1AP78559 2803 aaPredicted RBP18.92■□□□□ 0.62
APP-215ENST00000474136 SGK494L7N484 410 aa18.92■□□□□ 0.62
APP-215ENST00000474136 MYO1CO00159 1063 aa18.92■□□□□ 0.62
APP-215ENST00000474136 TYROBPO43914 113 aa18.92■□□□□ 0.62
APP-215ENST00000474136 NME2P1O60361 137 aa18.92■□□□□ 0.62
APP-215ENST00000474136 TOXO94900 526 aa18.92■□□□□ 0.62
APP-215ENST00000474136 NSA2O95478 260 aaKnown RBP18.92■□□□□ 0.62
APP-215ENST00000474136 CYC1P08574 325 aa18.92■□□□□ 0.62
APP-215ENST00000474136 RBP1P09455 135 aa18.92■□□□□ 0.62
APP-215ENST00000474136 NME2P22392 152 aa18.92■□□□□ 0.62
APP-215ENST00000474136 HPDP32754 393 aaPredicted RBP18.92■□□□□ 0.62
APP-215ENST00000474136 PTGS2P35354 604 aa18.92■□□□□ 0.62
APP-215ENST00000474136 RFC3P40938 356 aa18.92■□□□□ 0.62
APP-215ENST00000474136 AGTR2P50052 363 aa18.92■□□□□ 0.62
APP-215ENST00000474136 PNLIPRP1P54315 467 aa18.92■□□□□ 0.62
APP-215ENST00000474136 GBX1Q14549 363 aa18.92■□□□□ 0.62
APP-215ENST00000474136 ZNF227Q86WZ6 799 aa18.92■□□□□ 0.62
APP-215ENST00000474136 SPNS2Q8IVW8 549 aa18.92■□□□□ 0.62
APP-215ENST00000474136 RPRMLQ8N4K4 120 aa18.92■□□□□ 0.62
APP-215ENST00000474136 KIF2BQ8N4N8 673 aa18.92■□□□□ 0.62
APP-215ENST00000474136 LILRB4Q8NHJ6 448 aa18.92■□□□□ 0.62
APP-215ENST00000474136 RBCK1Q9BYM8 510 aa18.92■□□□□ 0.62
APP-215ENST00000474136 GALPQ9UBC7 116 aa18.92■□□□□ 0.62
APP-215ENST00000474136 MID2Q9UJV3 735 aa18.92■□□□□ 0.62
APP-215ENST00000474136 AKAP6Q13023 2319 aa18.91■□□□□ 0.62
APP-215ENST00000474136 A0A1B0GTL3 188 aa18.91■□□□□ 0.62
APP-215ENST00000474136 FOXO6A8MYZ6 492 aa18.91■□□□□ 0.62
APP-215ENST00000474136 H3BQF6 201 aa18.91■□□□□ 0.62
APP-215ENST00000474136 CCNDBP1O95273 360 aa18.91■□□□□ 0.62
APP-215ENST00000474136 KLK2P20151 261 aa18.91■□□□□ 0.62
APP-215ENST00000474136 MSX1P28360 303 aa18.91■□□□□ 0.62
APP-215ENST00000474136 RELAQ04206 551 aa18.91■□□□□ 0.62
APP-215ENST00000474136 ACTN3Q08043 901 aaPredicted RBP18.91■□□□□ 0.62
APP-215ENST00000474136 ACSBG2Q5FVE4 666 aa18.91■□□□□ 0.62
APP-215ENST00000474136 VN1R4Q7Z5H5 301 aa18.91■□□□□ 0.62
APP-215ENST00000474136 CCDC71Q8IV32 467 aaPredicted RBP18.91■□□□□ 0.62
APP-215ENST00000474136 MYO1HQ8N1T3 1032 aa18.91■□□□□ 0.62
APP-215ENST00000474136 FAM76AQ8TAV0 307 aa18.91■□□□□ 0.62
APP-215ENST00000474136 ASB5Q8WWX0 329 aa18.91■□□□□ 0.62
APP-215ENST00000474136 TSLPQ969D9 159 aa18.91■□□□□ 0.62
APP-215ENST00000474136 CCDC138Q96M89 665 aa18.91■□□□□ 0.62
APP-215ENST00000474136 CCM2LQ9NUG4 571 aaPredicted RBP18.91■□□□□ 0.62
APP-215ENST00000474136 UTP6Q9NYH9 597 aaKnown RBP18.91■□□□□ 0.62
APP-215ENST00000474136 PLLPQ9Y342 182 aa18.91■□□□□ 0.62
APP-215ENST00000474136 ABCA4P78363 2273 aa18.91■□□□□ 0.62
APP-215ENST00000474136 TMEM120BA0PK00 339 aa18.9■□□□□ 0.62
APP-215ENST00000474136 FAM221AA4D161 298 aa18.9■□□□□ 0.62
APP-215ENST00000474136 H7BY64 318 aa18.9■□□□□ 0.62
APP-215ENST00000474136 CDC123O75794 336 aaPredicted RBP18.9■□□□□ 0.62
APP-215ENST00000474136 MPC1LP0DKB6 136 aa18.9■□□□□ 0.62
APP-215ENST00000474136 TPP2P29144 1249 aaPredicted RBP18.9■□□□□ 0.62
APP-215ENST00000474136 CHRNB4P30926 498 aa18.9■□□□□ 0.62
APP-215ENST00000474136 BCL6P41182 706 aa18.9■□□□□ 0.62
APP-215ENST00000474136 CSHL1Q14406 222 aa18.9■□□□□ 0.62
APP-215ENST00000474136 ZNF460Q14592 562 aa18.9■□□□□ 0.62
APP-215ENST00000474136 ARHGAP19Q14CB8 494 aa18.9■□□□□ 0.62
APP-215ENST00000474136 ABRAXAS2Q15018 415 aa18.9■□□□□ 0.62
APP-215ENST00000474136 RPS19BP1Q86WX3 136 aaKnown RBP18.9■□□□□ 0.62
APP-215ENST00000474136 CENPLQ8N0S6 344 aaPredicted RBP18.9■□□□□ 0.62
APP-215ENST00000474136 RHEBL1Q8TAI7 183 aa18.9■□□□□ 0.62
APP-215ENST00000474136 ZCCHC10Q8TBK6 192 aa18.9■□□□□ 0.62
APP-215ENST00000474136 RDH11Q8TC12 318 aa18.9■□□□□ 0.62
APP-215ENST00000474136 ZNF480Q8WV37 535 aa18.9■□□□□ 0.62
APP-215ENST00000474136 EEF1AKMT1Q8WVE0 214 aa18.9■□□□□ 0.62
APP-215ENST00000474136 PRAP1Q96NZ9 151 aa18.9■□□□□ 0.62
APP-215ENST00000474136 LPAR4Q99677 370 aa18.9■□□□□ 0.62
APP-215ENST00000474136 MRPL57Q9BQC6 102 aaKnown RBP18.9■□□□□ 0.62
APP-215ENST00000474136 CXXC4Q9H2H0 198 aa18.9■□□□□ 0.62
APP-215ENST00000474136 KCNJ16Q9NPI9 418 aa18.9■□□□□ 0.62
APP-215ENST00000474136 HCFC1P51610 2035 aa18.89■□□□□ 0.61
APP-215ENST00000474136 E7ENX8 843 aa18.89■□□□□ 0.61
APP-215ENST00000474136 CDC40O60508 579 aaKnown RBP eCLIP18.89■□□□□ 0.617e-9■□□□□ 10.4
APP-215ENST00000474136 SPAG7O75391 227 aa18.89■□□□□ 0.61
APP-215ENST00000474136 RDH16O75452 317 aa18.89■□□□□ 0.61
APP-215ENST00000474136 PSIP1O75475 530 aaKnown RBP18.89■□□□□ 0.61
APP-215ENST00000474136 SLC16A8O95907 504 aa18.89■□□□□ 0.61
APP-215ENST00000474136 CREB1P16220 341 aa18.89■□□□□ 0.61
APP-215ENST00000474136 SLC26A5P58743 744 aa18.89■□□□□ 0.61
APP-215ENST00000474136 TAS2R50P59544 299 aa18.89■□□□□ 0.61
APP-215ENST00000474136 RHAGQ02094 409 aa18.89■□□□□ 0.61
APP-215ENST00000474136 TAP2Q03519 686 aa18.89■□□□□ 0.61
APP-215ENST00000474136 NSDHLQ15738 373 aa18.89■□□□□ 0.61
APP-215ENST00000474136 PDSS2Q86YH6 399 aa18.89■□□□□ 0.61
APP-215ENST00000474136 CPNE9Q8IYJ1 553 aa18.89■□□□□ 0.61
APP-215ENST00000474136 GIMAP7Q8NHV1 300 aa18.89■□□□□ 0.61
APP-215ENST00000474136 STAG3L4Q8TBR4 150 aa18.89■□□□□ 0.61
APP-215ENST00000474136 TCP10LQ8TDR4 215 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms