RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NEPROQ6NW34 567 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 MCM10Q7L590 875 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 NLRP14Q86W24 1093 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 OR4N5Q8IXE1 308 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 LIPHQ8WWY8 451 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 NABP1Q96AH0 204 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 AP2M1Q96CW1 435 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 ZNF274Q96GC6 653 aaPredicted RBP4.54□□□□□ -1.68
CLK1-209ENST00000472679 UBAC1Q9BSL1 405 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 FUT8Q9BYC5 575 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 MMADHCQ9H3L0 296 aaPredicted RBP4.54□□□□□ -1.68
CLK1-209ENST00000472679 HEXA-AS1Q9H8Q6 139 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 WDR41Q9HAD4 459 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 PLEKHA3Q9HB20 300 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 RPS10P5Q9NQ39 176 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 FAM212BQ9NTI7 297 aaPredicted RBP4.54□□□□□ -1.68
CLK1-209ENST00000472679 PSORS1C1Q9UIG5 152 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 CSAG2Q9Y5P2 127 aa4.54□□□□□ -1.68
CLK1-209ENST00000472679 SHISA9B4DS77 424 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 FCGR2BP31994 310 aaPredicted RBP4.53□□□□□ -1.68
CLK1-209ENST00000472679 FCGR2CP31995 323 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 PRELPP51888 382 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 CRYBA2P53672 197 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 ADARP55265 1226 aaKnown RBP4.53□□□□□ -1.68
CLK1-209ENST00000472679 SNU13P55769 128 aaKnown RBP4.53□□□□□ -1.68
CLK1-209ENST00000472679 IRX6P78412 446 aaPredicted RBP4.53□□□□□ -1.68
CLK1-209ENST00000472679 SLC34A1Q06495 639 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 ITPK1Q13572 414 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 ZNF789Q5FWF6 425 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 TEX35Q5T0J7 233 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 C1QTNF12Q5T7M4 302 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 TIPARPQ7Z3E1 657 aaKnown RBP4.53□□□□□ -1.68
CLK1-209ENST00000472679 RNF130Q86XS8 419 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 CACUL1Q86Y37 369 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 NUP93Q8N1F7 819 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 ELMOD1Q8N336 334 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 EPSTI1Q96J88 318 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 ALKBH3Q96Q83 286 aaPredicted RBP4.53□□□□□ -1.68
CLK1-209ENST00000472679 TAAR6Q96RI8 345 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 ERGIC2Q96RQ1 377 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 RAB11FIP5Q9BXF6 653 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 PINK1Q9BXM7 581 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 VIPAS39Q9H9C1 493 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 ZNF319Q9P2F9 582 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 UBQLN2Q9UHD9 624 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 NOTCH3Q9UM47 2321 aa4.53□□□□□ -1.68
CLK1-209ENST00000472679 TRBV5-4A0A0C4DH59 114 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 SMIM30A4D0T7 59 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 ACOD1A6NK06 481 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 ATP5DP30049 168 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 KRT83P78385 493 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 SRPXP78539 464 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 RBBP4Q09028 425 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 FCHO2Q0JRZ9 810 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 SIX1Q15475 284 aaPredicted RBP4.52□□□□□ -1.69
CLK1-209ENST00000472679 ZNF841Q6ZN19 808 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 KCTD9Q7L273 389 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 LAX1Q8IWV1 398 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 PHC2Q8IXK0 858 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 SPATA18Q8TC71 538 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 GGHQ92820 318 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 FAM46BQ96A09 425 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 TNFRSF13CQ96RJ3 184 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 ATF6BQ99941 703 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 C2orf40Q9H1Z8 148 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 S100A14Q9HCY8 104 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 GTSE1Q9NYZ3 720 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.52□□□□□ -1.69
CLK1-209ENST00000472679 STYXL1Q9Y6J8 313 aa4.52□□□□□ -1.69
CLK1-209ENST00000472679 TRGV8A0A0C4DH27 118 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 C13orf42A0A1B0GVH6 325 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 ATP6AP2A0A1C7CYW4 349 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 PDHXO00330 501 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 ZNF263O14978 683 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 SYT7O43581 403 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 OR6B1O95007 311 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 HOXD4P09016 255 aaPredicted RBP4.51□□□□□ -1.69
CLK1-209ENST00000472679 EZRP15311 586 aaKnown RBP4.51□□□□□ -1.69
CLK1-209ENST00000472679 IL4RP24394 825 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 CTNNA1P35221 906 aaKnown RBP4.51□□□□□ -1.69
CLK1-209ENST00000472679 RPS27AP62979 156 aaKnown RBP4.51□□□□□ -1.69
CLK1-209ENST00000472679 C17orf67Q0P5P2 114 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 RCN2Q14257 317 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 RFTN2Q52LD8 501 aaPredicted RBP4.51□□□□□ -1.69
CLK1-209ENST00000472679 GLRA4Q5JXX5 417 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 POM121L12Q8N7R1 296 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 C8orf46Q8TAG6 207 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 ADNPQ9H2P0 1102 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 JPT2Q9H910 190 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 RNPEPL1Q9HAU8 725 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 MED17Q9NVC6 651 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 MIS18AQ9NYP9 233 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 ITM2BQ9Y287 266 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 MMP24Q9Y5R2 645 aa4.51□□□□□ -1.69
CLK1-209ENST00000472679 SALL1Q9NSC2 1324 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 LOC390937A0A1W2PQ73 354 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 CHUKO15111 745 aa4.5□□□□□ -1.69
CLK1-209ENST00000472679 LYNP07948 512 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms