RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 P04436 131 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 ZSCAN5DPP0CG00 497 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 RPL22P35268 128 aaKnown RBP17.55■□□□□ 0.4
SORT1-203ENST00000471996 CYLC1P35663 651 aaPredicted RBP17.55■□□□□ 0.4
SORT1-203ENST00000471996 AHRP35869 848 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 SCTRP47872 440 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 HK2P52789 917 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 SORDQ00796 357 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 BBS9Q3SYG4 887 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 HSDL2Q6YN16 418 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 CAPN12Q6ZSI9 719 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 VWA5B2Q8N398 1253 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 TC2NQ8N9U0 490 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 SNF8Q96H20 258 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 CAPZA3Q96KX2 299 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 BDH2Q9BUT1 245 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 CCDC68Q9H2F9 335 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 ADAP2Q9NPF8 381 aa17.55■□□□□ 0.4
SORT1-203ENST00000471996 ANK3Q12955 4377 aaKnown RBP17.55■□□□□ 0.4
SORT1-203ENST00000471996 CTAGE9A4FU28 777 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 EPPINO95925 133 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 F7P08709 466 aaPredicted RBP17.54■□□□□ 0.4
SORT1-203ENST00000471996 CCL3P10147 92 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 TIMP3P35625 211 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 HSD17B7P56937 341 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 POU4F3Q15319 338 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 TMEM132CQ8N3T6 1108 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 SREK1Q8WXA9 508 aaKnown RBP17.54■□□□□ 0.4
SORT1-203ENST00000471996 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 Q96MF0 132 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 SPNS1Q9H2V7 528 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 KLHL31Q9H511 634 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 PARVBQ9HBI1 364 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 PRTFDC1Q9NRG1 225 aa17.54■□□□□ 0.4
SORT1-203ENST00000471996 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.54■□□□□ 0.4
SORT1-203ENST00000471996 CTAGE15A4D2H0 777 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 AHRRA9YTQ3 701 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 ZNF354AO60765 605 aaPredicted RBP17.53■□□□□ 0.4
SORT1-203ENST00000471996 C8GP07360 202 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 PAMP19021 973 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 ZNF136P52737 540 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 WNT3P56703 355 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 CTBP1Q13363 440 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 BMPR2Q13873 1038 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 ACSF3Q4G176 576 aaPredicted RBP17.53■□□□□ 0.4
SORT1-203ENST00000471996 CATSPEREQ5SY80 951 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 ZNF470Q6ECI4 717 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 OPN5Q6U736 354 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 PRSS57Q6UWY2 283 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 CTAGE6Q86UF2 777 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 C1orf54Q8WWF1 131 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 KIAA1191Q96A73 305 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 OR4K3Q96R72 315 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 LACRTQ9GZZ8 138 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 ZNF703Q9H7S9 590 aaPredicted RBP17.53■□□□□ 0.4
SORT1-203ENST00000471996 ACKR4Q9NPB9 350 aa17.53■□□□□ 0.4
SORT1-203ENST00000471996 FBXO6Q9NRD1 293 aaPredicted RBP17.53■□□□□ 0.4
SORT1-203ENST00000471996 MPDZO75970 2070 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 KDM4EB2RXH2 506 aaPredicted RBP17.52■□□□□ 0.4
SORT1-203ENST00000471996 C4orf51C9J302 202 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 CLDN4O14493 209 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 SMPD2O60906 423 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 IL2RAP01589 272 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 BASP1P80723 227 aaKnown RBP17.52■□□□□ 0.4
SORT1-203ENST00000471996 SNX1Q13596 522 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 ELAVL1Q15717 326 aaKnown RBP17.52■□□□□ 0.4
SORT1-203ENST00000471996 PHKG1Q16816 387 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 LRRC8EQ6NSJ5 796 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 LACC1Q8IV20 430 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 DENND6AQ8IWF6 608 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 ANKRD53Q8N9V6 530 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 TRPV3Q8NET8 790 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 NEIL3Q8TAT5 605 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 PYCR2Q96C36 320 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 PIP5K1AQ99755 562 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 SLC6A15Q9H2J7 730 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 EPB41L4BQ9H329 900 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 TRPS1Q9UHF7 1281 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 COMMD10Q9Y6G5 202 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 EPN1Q9Y6I3 576 aaPredicted RBP17.52■□□□□ 0.4
SORT1-203ENST00000471996 CLCA3PQ9Y6N3 262 aa17.52■□□□□ 0.4
SORT1-203ENST00000471996 RFPL3SP0C7P2 107 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 PIGAP37287 484 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 HNRNPFP52597 415 aaKnown RBP17.51■□□□□ 0.39
SORT1-203ENST00000471996 SLC13A2Q13183 592 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 SP140Q13342 867 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 DUPD1Q68J44 220 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 PALM2Q8IXS6 379 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 TMEM52Q8NDY8 209 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 OR8K3Q8NH51 312 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 OR56A3Q8NH54 315 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 EEF1AKMT1Q8WVE0 214 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 SMPDL3BQ92485 455 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 DAZLQ92904 295 aaKnown RBP17.51■□□□□ 0.39
SORT1-203ENST00000471996 DACH2Q96NX9 599 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 TSGA10Q9BZW7 698 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 AICDAQ9GZX7 198 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 ZFP64Q9NPA5 681 aa17.51■□□□□ 0.39
SORT1-203ENST00000471996 TLN2Q9Y4G6 2542 aa17.5■□□□□ 0.39
SORT1-203ENST00000471996 CES2O00748 559 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms