RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LRRC46Q96FV0 321 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 SNF8Q96H20 258 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 SEC16BQ96JE7 1060 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 FAR2Q96K12 515 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 SERPINB12Q96P63 405 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 FOXC2Q99958 501 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 AIF1LQ9BQI0 150 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 PELI2Q9HAT8 420 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 HPF1Q9NWY4 346 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 ADAMTS6Q9UKP5 1117 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 SH2B3Q9UQQ2 575 aa8.5□□□□□ -1.05
CPSF4-211ENST00000471455 YARS2Q9Y2Z4 477 aaKnown RBP8.5□□□□□ -1.05
CPSF4-211ENST00000471455 DNAJC13O75165 2243 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 ZNHIT1O43257 154 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 DIAPH2O60879 1101 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 ZFAND5O76080 213 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 TTC4O95801 387 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 KRT14P02533 472 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 SERPINA6P08185 405 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 ACVR2AP27037 513 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 GSTM2P28161 218 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 DNAJA1P31689 397 aaKnown RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 RFC3P40938 356 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 HSD17B7P56937 341 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 GPR85P60893 370 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 PPIAP62937 165 aaKnown RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 BTG2P78543 158 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 REEP5Q00765 189 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 TFF3Q07654 80 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 PMPCAQ10713 525 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 SLC25A35Q3KQZ1 300 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 HSP90AA5PQ58FG0 334 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 B3GNT6Q6ZMB0 384 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF227Q86WZ6 799 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 MARVELD2Q8N4S9 558 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 PSD4Q8NDX1 1056 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 NFAM1Q8NET5 270 aaPredicted RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 OR10Q1Q8NGQ4 319 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 UTP15Q8TED0 518 aaKnown RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 EEF1AKMT1Q8WVE0 214 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 FBXL8Q96CD0 374 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 SMC6Q96SB8 1091 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 NDNQ99608 321 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 NPLQ9BXD5 320 aaPredicted RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 RHBGQ9H310 441 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 IARS2Q9NSE4 1012 aaKnown RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 CORO1CQ9ULV4 474 aaPredicted RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 PPIEQ9UNP9 301 aaKnown RBP8.49□□□□□ -1.05
CPSF4-211ENST00000471455 KCNE2Q9Y6J6 123 aa8.49□□□□□ -1.05
CPSF4-211ENST00000471455 A8MUA0 341 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 KLK8O60259 260 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 WDR1O75083 606 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 FAM155BO75949 473 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 HAUS5O94927 633 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 PGAM1P18669 254 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 HNF4AP41235 474 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 ZFP36L2P47974 494 aaKnown RBP8.48□□□□□ -1.05
CPSF4-211ENST00000471455 NUP107P57740 925 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 RAB8AP61006 207 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 SLC13A2Q13183 592 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 ANKRD22Q5VYY1 191 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 PAQR3Q6TCH7 311 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 RTL4Q6ZR62 310 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 TMPRSS11BQ86T26 416 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 TGIF2LYQ8IUE0 185 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 CCDC71Q8IV32 467 aaPredicted RBP8.48□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF595Q8IYB9 648 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 SHISA5Q8N114 240 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 CA13Q8N1Q1 262 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 TMEM132CQ8N3T6 1108 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 FAM109AQ8N4B1 249 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 APCDD1LQ8NCL9 501 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 C2CD4AQ8NCU7 369 aaPredicted RBP8.48□□□□□ -1.05
CPSF4-211ENST00000471455 C7orf57Q8NEG2 295 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 TRIM58Q8NG06 486 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 OR52N2Q8NGI0 321 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 DAZLQ92904 295 aaKnown RBP8.48□□□□□ -1.05
CPSF4-211ENST00000471455 NEIL2Q969S2 332 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 NCLNQ969V3 563 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 GAL3ST3Q96A11 431 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 SARAFQ96BY9 339 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 PYCR2Q96C36 320 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 PDLIM2Q96JY6 352 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 SGCZQ96LD1 299 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 NAP1L3Q99457 506 aaPredicted RBP8.48□□□□□ -1.05
CPSF4-211ENST00000471455 FAM173AQ9BQD7 235 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 NAT9Q9BTE0 207 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 UCK2Q9BZX2 261 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 DEFB127Q9H1M4 99 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 CXXC4Q9H2H0 198 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 ZDHHC11Q9H8X9 412 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 ADAP2Q9NPF8 381 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 NECTIN3Q9NQS3 549 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 PRTFDC1Q9NRG1 225 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 PNO1Q9NRX1 252 aaKnown RBP8.48□□□□□ -1.05
CPSF4-211ENST00000471455 KCMF1Q9P0J7 381 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 B4GALT7Q9UBV7 327 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF407Q9C0G0 2248 aa8.48□□□□□ -1.05
CPSF4-211ENST00000471455 HCFC1P51610 2035 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 PHF3Q92576 2039 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms