RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TCRBV5S2A0A599 114 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 DHRS12A0PJE2 317 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 ELOVL7A1L3X0 281 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 TLCD2A6NGC4 264 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 TNFRSF10AO00220 468 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 CLIC1O00299 241 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 PDPK1O15530 556 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 C6orf47O95873 294 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 GPIP06744 558 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 ABCB1P08183 1280 aaPredicted RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 GLB1P16278 677 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 PSMA4P25789 261 aaKnown RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 SLC7A1P30825 629 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 GPR3P46089 330 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 PTDSS1P48651 473 aaKnown RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 ALDH9A1P49189 494 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 PCBP4P57723 403 aaKnown RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 HBA1P69905 142 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 GPLD1P80108 840 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 BNIP3Q12983 259 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 SLC14A1Q13336 389 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 MAP7Q14244 749 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 MLC1Q15049 377 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 NDUFAF5Q5TEU4 345 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 TMEM214Q6NUQ4 689 aaKnown RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 ZCCHC8Q6NZY4 707 aaKnown RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 ERICH5Q6P6B1 374 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 LRRC74BQ6ZQY2 392 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 ZNF621Q6ZSS3 439 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 CEP68Q76N32 757 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 TMEM126BQ8IUX1 230 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 MICU2Q8IYU8 434 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 OR4N4Q8N0Y3 316 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 DTWD1Q8N5C7 304 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 CSNK1A1LQ8N752 337 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 ZBTB44Q8NCP5 570 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 OR52E4Q8NGH9 312 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 OR10A6Q8NH74 314 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 CEP76Q8TAP6 659 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 ZFP90Q8TF47 636 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 OR5P2Q8WZ92 322 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 PIGKQ92643 395 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 POP5Q969H6 163 aaKnown RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 ZDHHC12Q96GR4 267 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 TCTN2Q96GX1 697 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 DUSP23Q9BVJ7 150 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 CHRNA10Q9GZZ6 450 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 GORASP2Q9H8Y8 452 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 TPT1P8Q9HAU6 139 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 IL21RQ9HBE5 538 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 PRDM9Q9NQV7 894 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 ACSS1Q9NUB1 689 aaPredicted RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 ZSCAN32Q9NX65 697 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 C6orf203Q9P0P8 240 aaPredicted RBP8.9□□□□□ -0.98
VPS52-216ENST00000471309 PHF11Q9UIL8 331 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 USP22Q9UPT9 525 aa8.9□□□□□ -0.98
VPS52-216ENST00000471309 ABCA7Q8IZY2 2146 aa8.9□□□□□ -0.99
VPS52-216ENST00000471309 TDRD6O60522 2096 aaKnown RBP8.9□□□□□ -0.99
VPS52-216ENST00000471309 NCOR1O75376 2440 aa8.9□□□□□ -0.99
VPS52-216ENST00000471309 KMT2EQ8IZD2 1858 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 MN1Q10571 1320 aaPredicted RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 MDC1Q14676 2089 aaKnown RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 IGHV1OR21-1A0A087WYE8 117 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 A0A1W2PR48 441 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SLC9B1P1A6NJY1 282 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 TXNDC9O14530 226 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 CASQ2O14958 399 aaPredicted RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 GSTA4O15217 222 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 DUX1O43812 170 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 B3GALT2O43825 422 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SH3BP5O60239 455 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SRPX2O60687 465 aaPredicted RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 PRAMEF10O60809 474 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 GMNNO75496 209 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 AIFM1O95831 613 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 NR2F6P10588 404 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ALPPL2P10696 532 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 UMPSP11172 480 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 PNLIPP16233 465 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 NCK1P16333 377 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ENGP17813 658 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 ALOX12P18054 663 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 EFNA1P20827 205 aaPredicted RBP8.89□□□□□ -0.99
VPS52-216ENST00000471309 VHLP40337 213 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 GABRA4P48169 554 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 POLE2P56282 527 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SESN3P58005 492 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 BTN3A2P78410 334 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 TNFRSF17Q02223 184 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 CYP51A1Q16850 503 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 HLA-BQ31612 363 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 CPZQ66K79 652 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 GLYATQ6IB77 296 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SLC48A1Q6P1K1 146 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 RNF111Q6ZNA4 994 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 FAM92BQ6ZTR7 304 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 BMP8AQ7Z5Y6 402 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 SPPL2CQ8IUH8 684 aa8.89□□□□□ -0.99
VPS52-216ENST00000471309 PQLC1Q8N2U9 271 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms