RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MOCS2O96007 188 aaPredicted RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 PIGRP01833 764 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 IGHG3P01860 377 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 DNTTP04053 509 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CCDC175P0C221 793 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 FAM86B2P0C5J1 330 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 OR9G9P0C7N8 305 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ATP6V1B1P15313 513 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 LBPP18428 481 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 PSMB4P28070 264 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 EEF1DP29692 281 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 SRD5A2P31213 254 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CRKLP46109 303 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 SLC1A6P48664 564 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 NPY4RP50391 375 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 HLCSP50747 726 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 RAD23AP54725 363 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 PTENP60484 403 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 RPS27AP62979 156 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 RBBP4Q09028 425 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 GPR50Q13585 617 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CAPRIN1Q14444 709 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 TOMM20Q15388 145 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 LTB4RQ15722 352 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 LRRK1Q38SD2 2015 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 TCP11X2Q5H9J9 407 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ARMCX4Q5H9R4 360 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 C6orf136Q5SQH8 315 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 REP15Q6BDI9 236 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 RPUSD3Q6P087 351 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 SLC27A4Q6P1M0 643 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ARMCX5Q6P1M9 558 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 RFWD3Q6PCD5 774 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 C16orf54Q6UWD8 224 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 PAMR1Q6UXH9 720 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 TMEM182Q6ZP80 229 aaPredicted RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 RAPH1Q70E73 1250 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ERN2Q76MJ5 926 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 KRT74Q7RTS7 529 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CCDC186Q7Z3E2 898 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 VASH2Q86V25 355 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 MEX3DQ86XN8 651 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CREBRFQ8IUR6 639 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 TDHQ8IZJ6 230 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CARNMT1Q8N4J0 409 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 SMYD1Q8NB12 490 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ZNRF1Q8ND25 227 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 OR13C5Q8NGS8 318 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 KIF18AQ8NI77 898 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 HEXDCQ8WVB3 486 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ST6GALNAC6Q969X2 333 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 BPIFA2Q96DR5 249 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 PPP1R16AQ96I34 528 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 FER1L6-AS2Q96M78 137 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ANKRD27Q96NW4 1050 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 MCCC1Q96RQ3 725 aaPredicted RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 HSD17B14Q9BPX1 270 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 TMX4Q9H1E5 349 aaPredicted RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 S100A14Q9HCY8 104 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 UBE2TQ9NPD8 197 aaPredicted RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CHCHD3Q9NX63 227 aaKnown RBP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 ITGA11Q9UKX5 1188 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 NIP7Q9Y221 180 aaKnown RBP eCLIP1.02□□□□□ -2.25
UBXN4-207ENST00000471246 SLC6A5Q9Y345 797 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 FBXO7Q9Y3I1 522 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 CCL27Q9Y4X3 112 aa1.02□□□□□ -2.25
UBXN4-207ENST00000471246 A0A0B4J203 849 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CCDC162PA2VCL2 907 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ZSCAN5CA6NGD5 496 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CDX4O14627 284 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 HDAC3O15379 428 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 P2RX6O15547 441 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ACSL4O60488 711 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 SRPX2O60687 465 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 TSC22D2O75157 780 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 RHBDL1O75783 438 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CALCAP01258 141 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PRB2P02812 416 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ANKRD34CP0C6C1 535 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 KRT3P12035 628 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PDGFRAP16234 1089 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 MGMTP16455 207 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ADRA2CP18825 462 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 GPX3P22352 226 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PTAFRP25105 342 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 FASP25445 335 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 OR3A1P47881 315 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CRMP1Q14194 572 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CDO1Q16878 200 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 C17orf58Q2M2W7 97 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 C2orf83Q53S99 150 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 SHEQ5VZ18 495 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PLPP4Q5VZY2 271 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 FAM91A1Q658Y4 838 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF776Q68DI1 518 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 DMKNQ6E0U4 476 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CGB2Q6NT52 195 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF730Q6ZMV8 503 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 RFPL4BQ6ZWI9 263 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ADCK2Q7Z695 626 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms