RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MLYCDO95822 493 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 F10P00742 488 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 HEXBP07686 556 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 CELA2AP08217 269 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 CYC1P08574 325 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ITGAMP11215 1152 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 COX6B1P14854 86 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 LSP1P33241 339 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 SLC6A12P48065 614 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 HSPA7P48741 367 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 AGTR2P50052 363 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 PNLIPRP1P54315 467 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ABCE1P61221 599 aaKnown RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 RELAQ04206 551 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 RBPJQ06330 500 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 GALNT1Q10472 559 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 BST1Q10588 318 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 FAM53BQ14153 422 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 FASTKQ14296 549 aaKnown RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 HKDC1Q2TB90 917 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 UNC50Q53HI1 259 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ABHD17BQ5VST6 288 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 TTC19Q6DKK2 380 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF425Q6IV72 752 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 CAPN13Q6MZZ7 669 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 XKRXQ6PP77 449 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ZCCHC23Q6ZST2 131 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 PAQR7Q86WK9 346 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ZC3H7AQ8IWR0 971 aaKnown RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 CSNK1A1LQ8N752 337 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF483Q8TF39 744 aaPredicted RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF480Q8WV37 535 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 SMPDL3AQ92484 453 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 C7orf26Q96N11 449 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 OR2A5Q96R48 311 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ACAT2Q9BWD1 397 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 TRIM8Q9BZR9 551 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 PCBD2Q9H0N5 130 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 GSTO2Q9H4Y5 243 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 SYNPO2LQ9H987 977 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 EML4Q9HC35 981 aaKnown RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 MRPS30Q9NP92 439 aaKnown RBP8.55□□□□□ -1.04
SF3A1-206ENST00000471037 THAP1Q9NVV9 213 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 OPTCQ9UBM4 332 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 TEKT2Q9UIF3 430 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 PCTPQ9UKL6 214 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 ANGPTL3Q9Y5C1 460 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 F8P00451 2351 aa8.55□□□□□ -1.04
SF3A1-206ENST00000471037 C2CD3Q4AC94 2353 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 E7ENX8 843 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 TXNDC9O14530 226 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 FFAR3O14843 346 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 GPR42O15529 346 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 CCNT2O60583 730 aaKnown RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 SLC19A2O60779 497 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 SHOX2O60902 331 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 WDR47O94967 919 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 HSPA4LO95757 839 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 C8orf89P0DMQ9 161 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 EZRP15311 586 aaKnown RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 EPB42P16452 691 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 SLC1A6P48664 564 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 EFNA3P52797 238 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 TBPL1P62380 186 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 ADORA2A-AS1P86434 159 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 OCRLQ01968 901 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 TAP2Q03519 686 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 CLCQ05315 142 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 PRDX1Q06830 199 aaKnown RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 LCP2Q13094 533 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 NAE1Q13564 534 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 GTF2H2Q13888 395 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 C18orf21Q32NC0 220 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 ICE2Q659A1 982 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 FAAH2Q6GMR7 532 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 GTF2H2CQ6P1K8 395 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 HOMEZQ8IX15 550 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 TEX9Q8N6V9 391 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 THAP3Q8WTV1 239 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 MMABQ96EY8 250 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 CHMP6Q96FZ7 201 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF317Q96PQ6 595 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF382Q96SR6 550 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 HAUS8Q9BT25 410 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 SGPP1Q9BX95 441 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 ATG10Q9H0Y0 220 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 CCDC177Q9NQR7 707 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 DNAJC11Q9NVH1 559 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 GPRC5BQ9NZH0 403 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF835Q9Y2P0 537 aa8.54□□□□□ -1.04
SF3A1-206ENST00000471037 ADGRG4Q8IZF6 3080 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 A0A0A6YYC8 382 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 GMNCA6NCL1 334 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 LRRC14BA6NHZ5 514 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 H0YIG0 161 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 I3L1I5 382 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms