RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 BRINP2Q9C0B6 783 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ROGDIQ9GZN7 287 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CHRNA10Q9GZZ6 450 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ZNF385DQ9H6B1 395 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 DMRT3Q9NQL9 472 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SDR39U1Q9NRG7 319 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 AIG1Q9NVV5 245 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 UCKL1Q9NWZ5 548 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SPHK1Q9NYA1 384 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ZIM2Q9NZV7 527 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 LRIT1Q9P2V4 623 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 TAGLN3Q9UI15 199 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 ADAM29Q9UKF5 820 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 POMT2Q9UKY4 750 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PADI4Q9UM07 663 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 SLC12A4Q9UP95 1085 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 CCL27Q9Y4X3 112 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 PCDHGB2Q9Y5G2 931 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 AP1M2Q9Y6Q5 423 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 COL5A1P20908 1838 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-202ENST00000470357 RP1P56715 2156 aa6.33□□□□□ -1.4
VAMP3-202ENST00000470357 MYO18BQ8IUG5 2567 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 A0A088AWK7 358 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PRAMEF33A0A0G2JMD5 474 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 OR2A25A4D2G3 310 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 TLCD2A6NGC4 264 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 MAGEB17A8MXT2 336 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PPM1DO15297 605 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 TOX3O15405 576 aaPredicted RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SH3BP5O60239 455 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 CBFA2T3O75081 653 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 GUCY1B2O75343 617 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 UNC5CO95185 931 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PRB1P04280 392 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SLC35G6P0C7Q6 338 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 ZNF10P21506 573 aaPredicted RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 CDH3P22223 829 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PEBP1P30086 187 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 GRIA3P42263 894 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 RAP1GDS1P52306 607 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 RPS13P62277 151 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 RPL38P63173 70 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SKP1P63208 163 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 HMGCS1Q01581 520 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 KLF10Q13118 480 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SLC14A1Q13336 389 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 CYLC2Q14093 348 aaPredicted RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SHBQ15464 509 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 COQ5Q5HYK3 327 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 DEPDC1Q5TB30 811 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 IL23RQ5VWK5 629 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 KHDRBS2Q5VWX1 349 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 KIAA1614Q5VZ46 1190 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 TMEM198Q66K66 360 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 NIPAL1Q6NVV3 410 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 GALNT18Q6P9A2 607 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 FIGLAQ6QHK4 219 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SCIMPQ6UWF3 145 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PAQR7Q86WK9 346 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 KMT5CQ86Y97 462 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SLC35F3Q8IY50 421 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 ARHGAP24Q8N264 748 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PCYOX1LQ8NBM8 494 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 MFSD9Q8NBP5 474 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 CAMKVQ8NCB2 501 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 OR2I1PQ8NGU4 316 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 OR2T11Q8NH01 316 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 FLVCR1-AS1Q8TAF5 88 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 BAHD1Q8TBE0 780 aaPredicted RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 RSC1A1Q92681 617 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 RGMAQ96B86 450 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 MTFMTQ96DP5 389 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 TCTN2Q96GX1 697 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 FCRL1Q96LA6 429 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PRPF18Q99633 342 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 ZFYVE21Q9BQ24 234 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 DPH2Q9BQC3 489 aaPredicted RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 TBC1D10AQ9BXI6 508 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 MS4A8Q9BY19 250 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 ABCG4Q9H172 646 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SLC6A20Q9NP91 592 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 FARSBQ9NSD9 589 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 ARMCX1Q9P291 453 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 DKK4Q9UBT3 224 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 SH2B3Q9UQQ2 575 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 GPR45Q9Y5Y3 372 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 PTGDR2Q9Y5Y4 395 aa6.32□□□□□ -1.4
VAMP3-202ENST00000470357 COPG1Q9Y678 874 aaKnown RBP6.32□□□□□ -1.4
VAMP3-202ENST00000470357 A0A087WV48 116 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 IGHV1OR21-1A0A087WYE8 117 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 IGKV1-8A0A0C4DH67 115 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 GNG14A0A1W2PPG7 69 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ARHGAP10A1A4S6 786 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 FAM234BA2RU67 622 aa6.31□□□□□ -1.4
VAMP3-202ENST00000470357 ANGPT2O15123 496 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms