RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 EPB41L4BQ9H329 900 aa10.81□□□□□ -0.68
CDHR3-205ENST00000468143 SEMA4BQ9NPR2 832 aaPredicted RBP10.81□□□□□ -0.68
CDHR3-205ENST00000468143 AGPAT4Q9NRZ5 378 aa10.81□□□□□ -0.68
CDHR3-205ENST00000468143 KCMF1Q9P0J7 381 aa10.81□□□□□ -0.68
CDHR3-205ENST00000468143 TBK1Q9UHD2 729 aa10.81□□□□□ -0.68
CDHR3-205ENST00000468143 FBXW2Q9UKT8 454 aa10.81□□□□□ -0.68
CDHR3-205ENST00000468143 MMACHCQ9Y4U1 282 aa10.81□□□□□ -0.68
CDHR3-205ENST00000468143 TRAV17A0A0B4J275 112 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 ANKUB1A6NFN9 424 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SAGE2PA6NJ88 616 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 FOXO6A8MYZ6 492 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 PPP6CO00743 305 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 CTNSO60931 367 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 LDB3O75112 727 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SEMA7AO75326 666 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 AGFG2O95081 481 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 CLDN9O95484 217 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 IFNA16P05015 189 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 HIST1H1TP22492 207 aaPredicted RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 CD96P40200 585 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SSR2P43308 183 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 RAP1GDS1P52306 607 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 CDH13P55290 713 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 HSD17B7P56937 341 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TAS2R50P59544 299 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 ID2Q02363 134 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 OC90Q02509 493 aaPredicted RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SLAMF1Q13291 335 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TUBA3CQ13748 450 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 ZRSR2Q15696 482 aaKnown RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TMEM35AQ53FP2 167 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 FAM219BQ5XKK7 198 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SPINK14Q6IE38 97 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TUBA3EQ6PEY2 450 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 RPS19BP1Q86WX3 136 aaKnown RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 OR4N5Q8IXE1 308 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 ZNF595Q8IYB9 648 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TMEM151AQ8N4L1 468 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SLC5A8Q8N695 610 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SRFBP1Q8NEF9 429 aaKnown RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SUN3Q8TAQ9 357 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 THAP3Q8WTV1 239 aaPredicted RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 FAR1Q8WVX9 515 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 SIGLEC12Q96PQ1 595 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TAAR6Q96RI8 345 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 BARD1Q99728 777 aaKnown RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 MRPL57Q9BQC6 102 aaKnown RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 ALOXE3Q9BYJ1 711 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 ROGDIQ9GZN7 287 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 MRPL46Q9H2W6 279 aaKnown RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 L2HGDHQ9H9P8 463 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 ZBTB26Q9HCK0 441 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 DMRT3Q9NQL9 472 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 KLHL1Q9NR64 748 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TMEM216Q9P0N5 145 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 PCTPQ9UKL6 214 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 MRPS33Q9Y291 106 aaKnown RBP10.8□□□□□ -0.68
CDHR3-205ENST00000468143 PCDHGA11Q9Y5H2 935 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 CLDN16Q9Y5I7 305 aa10.8□□□□□ -0.68
CDHR3-205ENST00000468143 TRBV11-1A0A0K0K1C0 115 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 A0A1B0GTL3 188 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 A0A1W2PPM1 405 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 CLEC18AA5D8T8 446 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 GABRR3A8MPY1 467 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 A8MT66 165 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 H0YIV9 168 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 STX16-NPEPL1H3BU86 382 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 PLPP1O14494 284 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 STX16O14662 325 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 PRAMEF2O60811 474 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 ETHE1O95571 254 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 SHBGP04278 402 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 TNNI3P19429 210 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 CPN2P22792 545 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 PTX3P26022 381 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 TPP2P29144 1249 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 SERPINB1P30740 379 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 PIK3CBP42338 1070 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 CCNG1P51959 295 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 STX4Q12846 297 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 ELOAQ14241 798 aaKnown RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 SGO1Q5FBB7 561 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 ZNF468Q5VIY5 522 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 TTC19Q6DKK2 380 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 RPUSD3Q6P087 351 aaKnown RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 FAM180AQ6UWF9 173 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 CLEC18BQ6UXF7 455 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 TIFABQ6ZNK6 161 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 MILR1Q7Z6M3 343 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 L3MBTL4Q8NA19 623 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 CLEC18CQ8NCF0 446 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 WDR20Q8TBZ3 569 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 ADAMTS18Q8TE60 1221 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 UBLCP1Q8WVY7 318 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 RGMAQ96B86 450 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 MTBPQ96DY7 904 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 UTP23Q9BRU9 249 aaKnown RBP10.79□□□□□ -0.68
CDHR3-205ENST00000468143 HES7Q9BYE0 225 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 DEFB126Q9BYW3 111 aa10.79□□□□□ -0.68
CDHR3-205ENST00000468143 RNF32Q9H0A6 362 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms