RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 SETD9Q8NE22 299 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 PPP1R35Q8TAP8 253 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 TCP10LQ8TDR4 215 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 ADAMTS15Q8TE58 950 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 CXorf40AQ8TE69 158 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 TFB1MQ8WVM0 346 aaKnown RBP7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 PIH1D2Q8WWB5 315 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 TNFRSF14Q92956 283 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 IMP4Q96G21 291 aaKnown RBP7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 FEM1CQ96JP0 617 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 FAR2Q96K12 515 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 TRIB3Q96RU7 358 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 CCT8L2Q96SF2 557 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 WRAP53Q9BUR4 548 aaKnown RBP7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC25A23Q9BV35 468 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 BOCQ9BWV1 1114 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 TBC1D10AQ9BXI6 508 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC17A9Q9BYT1 436 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 WDR26Q9H7D7 661 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 LRRC4CQ9HCJ2 640 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 KLHL1Q9NR64 748 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 DNAJC11Q9NVH1 559 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 NDE1Q9NXR1 346 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 B4GALT6Q9UBX8 382 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 ACSL6Q9UKU0 697 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 PPIL1Q9Y3C6 166 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 LOXL2Q9Y4K0 774 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 PCDHGC4Q9Y5F7 938 aa7.01□□□□□ -1.29
RPUSD3-212ENST00000466141 SPTBN1Q01082 2364 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 A0A0J9YYE9 177 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 A0A0U1RQV5 110 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 A0A1W2PQM1 296 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 TCRBV7S2A1N4TA0A589 114 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 RHPN2P1A8MT19 583 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 HACD1B0YJ81 288 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 D6RAR5 112 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 CES2O00748 559 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 TXNDC9O14530 226 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 PGRMC2O15173 223 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 MMP20O60882 483 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 BCAS1O75363 584 aaPredicted RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 TUSC2O75896 110 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 TM7SF2O76062 418 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 PAK4O96013 591 aaPredicted RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 TRBC1P01850 177 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 RPLP0P05388 317 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 FABP1P07148 127 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 ELFN1P0C7U0 828 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 UMPSP11172 480 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 CHRM3P20309 590 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 CD68P34810 354 aaPredicted RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 SLCO1A2P46721 670 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 CAPZA2P47755 286 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 ARCN1P48444 511 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 CCR9P51686 369 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 PFN3P60673 137 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 PSMA6P60900 246 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 CCL7P80098 99 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 IRF4Q15306 451 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 LTB4RQ15722 352 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 TEX44Q53QW1 395 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 RIPPLY2Q5TAB7 128 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 PAPD7Q5XG87 772 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 METAP1DQ6UB28 335 aaPredicted RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 USP45Q70EL2 814 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 FKBP9P1Q75LS8 142 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 ZNF765Q7L2R6 523 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 TSPAN33Q86UF1 283 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 HIPK1Q86Z02 1210 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 NAGSQ8N159 534 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 UBE2J2Q8N2K1 259 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 ZNF781Q8N8C0 355 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 TTC29Q8NA56 475 aaPredicted RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 KYQ8NBH2 561 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC13A3Q8WWT9 602 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 HTRA1Q92743 480 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 DIO2Q92813 273 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 NAT6Q93015 286 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 MAP6Q96JE9 813 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 ELMO2Q96JJ3 720 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 DNAJC1Q96KC8 554 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 TEKT5Q96M29 485 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 COQ10AQ96MF6 247 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 QRFPRQ96P65 431 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 SMIM14Q96QK8 99 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 LYSMD1Q96S90 227 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 FAM118BQ9BPY3 351 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 SEC22CQ9BRL7 303 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 LRRC61Q9BV99 259 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 DDX47Q9H0S4 455 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 SLC25A51Q9H1U9 297 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 GLOD4Q9HC38 313 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 MID1IP1Q9NPA3 183 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 ZNF71Q9NQZ8 489 aaPredicted RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 FAM120CQ9NX05 1096 aaKnown RBP7□□□□□ -1.29
RPUSD3-212ENST00000466141 NINJ2Q9NZG7 142 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 NCKIPSDQ9NZQ3 722 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 CPNE7Q9UBL6 633 aa7□□□□□ -1.29
RPUSD3-212ENST00000466141 SPASTQ9UBP0 616 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms