RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ADNP2Q6IQ32 1131 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 TRIM40Q6P9F5 258 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 SYT10Q6XYQ8 523 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 Q6ZPB1 254 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 GALNTL5Q7Z4T8 443 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 UBE3DQ7Z6J8 389 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 FJX1Q86VR8 437 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 LAS2Q8IYD9 372 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 SNX31Q8N9S9 440 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 C7orf57Q8NEG2 295 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 RHEBL1Q8TAI7 183 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 FBF1Q8TES7 1133 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF473Q8WTR7 871 aaKnown RBP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 UBTD2Q8WUN7 234 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 UBE2E3Q969T4 207 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 GPR137Q96N19 417 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 TBCDQ9BTW9 1192 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 HES7Q9BYE0 225 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 LYRM4Q9HD34 91 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 ZDHHC18Q9NUE0 388 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 ANKRD10Q9NXR5 420 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 NUDT4Q9NZJ9 180 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 VTI1BQ9UEU0 232 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 RNF112Q9ULX5 631 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 DAPP1Q9UN19 280 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 MRPS33Q9Y291 106 aaKnown RBP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 ACOT9Q9Y305 439 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 TSC22D4Q9Y3Q8 395 aa8.55□□□□□ -1.04
BRCA1-207ENST00000461798 KLF2Q9Y5W3 355 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-207ENST00000461798 CENPEQ02224 2701 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ITPR2Q14571 2701 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 TRGV8A0A0C4DH27 118 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 A0A0G2JN53 185 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 HMX2A2RU54 273 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 K7EPI3 171 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 CCL21O00585 134 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 FCHO1O14526 889 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ASNA1O43681 348 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 KLK8O60259 260 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 SLC19A2O60779 497 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 KERAO60938 352 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 SLC25A12O75746 678 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ZFAND5O76080 213 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 S100BP04271 92 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 LTA4HP09960 611 aaKnown RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 MTHFD2P13995 350 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 TFEBP19484 476 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 SERPINB1P30740 379 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ARFIP1P53367 373 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 PLA2G16P53816 162 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 PRSS12P56730 875 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ALDH6A1Q02252 535 aaKnown RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 CHIT1Q13231 466 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ELAVL1Q15717 326 aaKnown RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 FBXO48Q5FWF7 155 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 SP5Q6BEB4 398 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 RPTNQ6XPR3 784 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 BNC2Q6ZN30 1099 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 RAPH1Q70E73 1250 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 CMC1Q7Z7K0 106 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 TBC1D1Q86TI0 1168 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 CCDC25Q86WR0 208 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 TICAM1Q8IUC6 712 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 SPPL2CQ8IUH8 684 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 RELL1Q8IUW5 271 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 CHERPQ8IWX8 916 aaKnown RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 C17orf53Q8N3J3 647 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 TMEM132CQ8N3T6 1108 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 POGLUT1Q8NBL1 392 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 FAM98AQ8NCA5 519 aaKnown RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 TMEM52Q8NDY8 209 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 OR7G3Q8NG95 312 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ITLN2Q8WWU7 325 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 CCT6BQ92526 530 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 VMP1Q96GC9 406 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 KCNC2Q96PR1 638 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 F2RL3Q96RI0 385 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 MS4A8Q9BY19 250 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 FUT8Q9BYC5 575 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ALG9Q9H6U8 611 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ADAP2Q9NPF8 381 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 KLHL1Q9NR64 748 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 GMPR2Q9P2T1 348 aaKnown RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 SUCOQ9UBS9 1254 aaKnown RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ADGRE2Q9UHX3 823 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ZNF223Q9UK11 482 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-207ENST00000461798 ASB1Q9Y576 335 aa8.54□□□□□ -1.04
BRCA1-207ENST00000461798 A0A087X1B8 175 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 TRBV11-1A0A0K0K1C0 115 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 TMEM200CA6NKL6 621 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 A8MUA0 341 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CCNT2O60583 730 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 MYO1DO94832 1006 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 C2P06681 752 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 AGAP20933 346 aa8.53□□□□□ -1.04
BRCA1-207ENST00000461798 ATP5A1P25705 553 aaKnown RBP8.53□□□□□ -1.04
BRCA1-207ENST00000461798 CERS1P27544 350 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms