RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 BBS12Q6ZW61 710 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 BTLAQ7Z6A9 289 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 PM20D2Q8IYS1 436 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 RASGEF1CQ8N431 466 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 PPFIBP2Q8ND30 876 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 SLC13A3Q8WWT9 602 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 NCLNQ969V3 563 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 HAUS1Q96CS2 278 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 PPP1R2P1Q96PQ5 205 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 TRIB1Q96RU8 372 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 TIMP4Q99727 224 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 OSBPL8Q9BZF1 889 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 NECTIN3Q9NQS3 549 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 HOMER3Q9NSC5 361 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 PPIEQ9UNP9 301 aaKnown RBP11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 R3HDM2Q9Y2K5 976 aaKnown RBP11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 ATG4BQ9Y4P1 393 aa11.57□□□□□ -0.56
AC004540.1-204ENST00000449537 PKD1L1Q8TDX9 2849 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 FREM3P0C091 2139 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 IGKV3D-11A0A0A0MRZ8 115 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 GOLGA6L10A0A0M3HER8 536 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 MBD3L3A6NE82 208 aaPredicted RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 E7ENX8 843 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 APOC4-APOC2K7ER74 178 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 PGRMC1O00264 195 aaKnown RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 PRMT5O14744 637 aaPredicted RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 MATN4O95460 622 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 GOT2P00505 430 aaKnown RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 APOC2P02655 101 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 TMIGD3P0DMS9 266 aaPredicted RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 CRYGSP22914 178 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 HRH2P25021 359 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 GPR143P51810 404 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 SKP1P63208 163 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 OLR1P78380 273 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 TAP2Q03519 686 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 TERF2Q15554 542 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 ETFDHQ16134 617 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 LIPNQ5VXI9 398 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 ASPGQ86U10 573 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 MBD3L2Q8NHZ7 208 aaPredicted RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 ACTRT1Q8TDG2 376 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 OSBPL9Q96SU4 736 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 KCNK17Q96T54 332 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 PKP4Q99569 1192 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 CALHM2Q9HA72 323 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 PNO1Q9NRX1 252 aaKnown RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 QPCTLQ9NXS2 382 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 KLHL28Q9NXS3 571 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 LPAR3Q9UBY5 353 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 TSR3Q9UJK0 312 aaKnown RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 PACSIN2Q9UNF0 486 aaPredicted RBP11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 DOCK7Q96N67 2140 aa11.56□□□□□ -0.56
AC004540.1-204ENST00000449537 RAI1Q7Z5J4 1906 aaPredicted RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 MYO1CO00159 1063 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 GALR3O60755 368 aaPredicted RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 CCL3P10147 92 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 CFPP27918 469 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 PIGAP37287 484 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 TERF1P54274 439 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 OCRLQ01968 901 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 CKAP4Q07065 602 aaKnown RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 DUSP8Q13202 625 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 P3H1Q32P28 736 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 DEFB134Q4QY38 66 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 FASTKD1Q53R41 847 aaKnown RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 UBAP2Q5T6F2 1119 aaKnown RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 CCDC181Q5TID7 509 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 NIPAL1Q6NVV3 410 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 AFTPHQ6ULP2 937 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 CAND1Q86VP6 1230 aaKnown RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 OR4L1Q8NH43 312 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 RUNDC3BQ96NL0 473 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 SLC30A3Q99726 388 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 MED18Q9BUE0 208 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 ZNF703Q9H7S9 590 aaPredicted RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 ZFP64Q9NPA5 681 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 BOKQ9UMX3 212 aaPredicted RBP11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 CAMK2AQ9UQM7 478 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 DYSFO75923 2080 aa11.55□□□□□ -0.56
AC004540.1-204ENST00000449537 A8MXE2 369 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PSMD12O00232 456 aaPredicted RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 AVILO75366 819 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 STK10O94804 968 aaKnown RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 SLC16A8O95907 504 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 SLC35G6P0C7Q6 338 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PAFAH1B1P43034 410 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 DIO3P55073 304 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 CRYZQ08257 329 aaKnown RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 FOXF2Q12947 444 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 KLF1Q13351 362 aaPredicted RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 SEMA3AQ14563 771 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
AC004540.1-204ENST00000449537 C6orf52Q5T4I8 152 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms