RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 RBM4BQ9BQ04 359 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 RBM4Q9BWF3 364 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 SPATA9Q9BWV2 254 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 OSBPL10Q9BXB5 764 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 GPR174Q9BXC1 333 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 TOR3AQ9H497 397 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 CXorf36Q9H7Y0 433 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 CLK4Q9HAZ1 481 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 LTB4R2Q9NPC1 389 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLAMF7Q9NQ25 335 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 C2orf42Q9NWW7 574 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 VNN3Q9NY84 501 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 CA14Q9ULX7 337 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 SNX11Q9Y5W9 270 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 CCDC160A6NGH7 325 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZW10O43264 779 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 KRT75O95678 551 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 GLULP15104 373 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 NDUFS1P28331 727 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 PCGF2P35227 344 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 TPD52P55327 224 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 FOXD4Q12950 439 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 SCARB2Q14108 478 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 TEAD4Q15561 434 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 CYP27C1Q4G0S4 372 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 TOR1AIP1Q5JTV8 583 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 NDUFAF5Q5TEU4 345 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR2T5Q6IEZ7 315 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF793Q6ZN11 406 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 TMEM26Q6ZUK4 368 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLC44A2Q8IWA5 706 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 METTL25Q8N6Q8 603 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR2T29Q8NH02 315 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 SPPL2AQ8TCT8 520 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 PATE1Q8WXA2 126 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 MAGED4Q96JG8 741 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 PHF7Q9BWX1 381 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 AICDAQ9GZX7 198 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 KLHL25Q9H0H3 589 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 TCEAL2Q9H3H9 227 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 DDX31Q9H8H2 851 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 CD320Q9NPF0 282 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR6C2Q9NZP2 312 aa9.06□□□□□ -0.96
COL6A4P1-201ENST00000446690 GSAPA4D1B5 854 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TTC36A6NLP5 189 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 PRAMEF26H0Y7S4 382 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TNFRSF10CO14798 259 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZSCAN9O15535 394 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 COQ9O75208 318 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TNFRSF21O75509 655 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TNFP01375 233 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 IGHV4-34P06331 123 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 F3P13726 295 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 POLR2CP19387 275 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TNFRSF1BP20333 461 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 UQCRC2P22695 453 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 PTGER1P34995 402 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 YPEL5P62699 121 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ADARB1P78563 741 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 CDK6Q00534 326 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ILF3Q12906 894 aaKnown RBP eCLIP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 LSAMPQ13449 338 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SMAD4Q13485 552 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLC9A5Q14940 896 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 NADK2Q4G0N4 442 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TMEM35AQ53FP2 167 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TNFAIP8L2Q6P589 184 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 GALNT5Q7Z7M9 940 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 PATL1Q86TB9 770 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 HIPK1Q86Z02 1210 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 FAM160A2Q8N612 972 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 DEFB119Q8N690 84 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF555Q8NEP9 628 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR5P2Q8WZ92 322 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 MS4A6EQ96DS6 147 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 GAS2L1Q99501 681 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 BARD1Q99728 777 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TPSD1Q9BZJ3 242 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 RUBCNLQ9H714 662 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 UBE2ZQ9H832 354 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 C1GALT1Q9NS00 363 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 FBXW2Q9UKT8 454 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SNX7Q9UNH6 387 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ORC6Q9Y5N6 252 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 NUP214P35658 2090 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 A0A0A6YYD5 115 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR6C74A6NCV1 312 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 H0YAE9 185 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 M0QX08 132 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 GCM2O75603 506 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ERAL1O75616 437 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SRFP11831 508 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 HOXB6P17509 224 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 GPC1P35052 558 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 MAGEA2P43356 314 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 YAP1P46937 504 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 RABIFP47224 123 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR1E2P47887 323 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms