RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 DENND2DQ9H6A0 471 aaPredicted RBP11.29□□□□□ -0.6
FN1-212ENST00000446046 ENTPD2Q9Y5L3 495 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 LOC102723532A0A0G2JNH3 316 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 EPCAMP16422 314 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 HSD11B2P80365 405 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TGFBIQ15582 683 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 AKIRIN2Q53H80 203 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TPRG1LQ5T0D9 272 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 ZNF627Q7L945 461 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TMEM74Q96NL1 305 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TVP23BQ9NYZ1 205 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 A0A1W2PP18 115 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 C1orf226A1L170 272 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TGM5O43548 720 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 THEGLP0DJG4 465 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 OR12D2P58182 307 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 ACTC1P68032 377 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 ACTA1P68133 377 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 CLCA4Q14CN2 919 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 RBM15BQ8NDT2 890 aaKnown RBP11.29□□□□□ -0.6
FN1-212ENST00000446046 OR1F2PQ96R84 312 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 GNB5O14775 395 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 CSTAP01040 98 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 GSTT1P30711 240 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 CRISP1P54107 249 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 OR2B6P58173 313 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 PLCXD2Q0VAA5 305 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 POU4F2Q12837 409 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 MFSD13AQ14CX5 517 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 ABRAXAS2Q15018 415 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 SLC39A4Q6P5W5 647 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 AKAP14Q86UN6 197 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 LNX2Q8N448 690 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 FANK1Q8TC84 345 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 OR5P2Q8WZ92 322 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 AKAP1Q92667 903 aaKnown RBP eCLIP11.29□□□□□ -0.62e-27■□□□□ 9.6
FN1-212ENST00000446046 LPAR4Q99677 370 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 FOCADQ5VW36 1801 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TP53BP1Q12888 1972 aaPredicted RBP11.29□□□□□ -0.6
FN1-212ENST00000446046 AXIN1O15169 862 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 OAZ2O95190 189 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 SOX9P48436 509 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 TGFBR3Q03167 851 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 KLHDC10Q6PID8 442 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 C17orf99Q6UX52 265 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 LAS2Q8IYD9 372 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 ZNF382Q96SR6 550 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 AKTIPQ9H8T0 292 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 SRPK3Q9UPE1 567 aa11.29□□□□□ -0.6
FN1-212ENST00000446046 CCRL2O00421 344 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 OR7A10O76100 309 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 S100A6P06703 90 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 MTPNP58546 118 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ABHD18Q0P651 414 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 PMS2P3Q13401 168 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ADAM15Q13444 863 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 TDGQ13569 410 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 LRP8Q14114 963 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 RANBP9Q96S59 729 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 BAIAP2Q9UQB8 552 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 DOCK6Q96HP0 2047 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 C9IYK1 514 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 CYB5BO43169 146 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ZNF234Q14588 700 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 GPR137CQ8N3F9 429 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 RAB2BQ8WUD1 216 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 PKP4Q99569 1192 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 SMOQ99835 787 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 A0A1W2PPL8 197 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 SLC33A1O00400 549 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 S100A7P31151 101 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ZNF267Q14586 743 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 HSF5Q4G112 596 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 CLEC12AQ5QGZ9 265 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 TSPEARQ8WU66 669 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 WDR77Q9BQA1 342 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 PREBQ9HCU5 417 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 HSFX1Q9UBD0 423 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 A0A0D9SEW6 157 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 A0A0G2JN53 185 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 PRAMEF2O60811 474 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 CA3P07451 260 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ENTPD1P49961 510 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ARG2P78540 354 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 MLLT1Q03111 559 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 KCNJ11Q14654 390 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 MAD2L1BPQ15013 274 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 EML3Q32P44 896 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 PTCHD3Q3KNS1 767 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 RBM44Q6ZP01 1051 aaKnown RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 BANPQ8N9N5 519 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ISG20Q96AZ6 181 aaKnown RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 PLOD2O00469 737 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 MTX2O75431 263 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms