RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 H3BNH8 94 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 ERI3O43414 337 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 ETFAP13804 333 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 HIST1H1TP22492 207 aaPredicted RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 MAGEA8P43361 318 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 RPL5P46777 297 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 ADARB1P78563 741 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 SPIDRQ14159 915 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 SLC5A12Q1EHB4 618 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 KCTD21Q4G0X4 260 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 LIN52Q52LA3 116 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 TJAP1Q5JTD0 557 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 TOR1AIP1Q5JTV8 583 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 TTC23Q5W5X9 447 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 ABHD17CQ6PCB6 329 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 SHQ1Q6PI26 577 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 TBPL2Q6SJ96 375 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 SPESP1Q6UW49 350 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 NRROSQ86YC3 692 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 DCP2Q8IU60 420 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 NEURL3Q96EH8 262 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 THAP11Q96EK4 314 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 NRBF2Q96F24 287 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 TEFMQ96QE5 360 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 DOHHQ9BU89 302 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 YTHDF1Q9BYJ9 559 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 ROGDIQ9GZN7 287 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 CLK4Q9HAZ1 481 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 THUMPD1Q9NXG2 353 aaKnown RBP14.91□□□□□ -0.02
SNX13-204ENST00000444712 C3orf18Q9UK00 162 aa14.91□□□□□ -0.02
SNX13-204ENST00000444712 SPTY2D1-AS1A0A0U1RR47 76 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 SMIM31A0A1B0GVY4 71 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 MAP3K13O43283 966 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 SNAP29O95721 258 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 C1QCP02747 245 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 NUDT7P0C024 238 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 ARAFP10398 606 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 NTSP30990 170 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 DCTP40126 519 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 RAD23AP54725 363 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 DSTNP60981 165 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 PPP2R2BQ00005 443 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 HYAL2Q12891 473 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 NDUFAF5Q5TEU4 345 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 SAXO2Q658L1 398 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 RNF130Q86XS8 419 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 ZNF555Q8NEP9 628 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 PJA1Q8NG27 643 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 PSMA8Q8TAA3 256 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 GAL3ST3Q96A11 431 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 GPR174Q9BXC1 333 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 GABARAPL1Q9H0R8 117 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 EPB41L1Q9H4G0 881 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 EPS8L2Q9H6S3 715 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 LMAN1LQ9HAT1 526 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 GPR27Q9NS67 375 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 GPATCH2Q9NW75 528 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 LYARQ9NX58 379 aaKnown RBP14.9□□□□□ -0.02
SNX13-204ENST00000444712 SNX8Q9Y5X2 465 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 A0A1W2PPC4 97 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 URADA6NGE7 173 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 BTN3A3O00478 584 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 TNFSF14O43557 240 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 THEGLP0DJG4 465 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 ITGA1P56199 1179 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 SELENOWP63302 87 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 CDK6Q00534 326 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 TFF2Q03403 129 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 RELAQ04206 551 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 APOFQ13790 326 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 PRSS53Q2L4Q9 553 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 COX20Q5RI15 118 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 TTC33Q6PID6 262 aaPredicted RBP14.9□□□□□ -0.02
SNX13-204ENST00000444712 TMEM26Q6ZUK4 368 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 USP51Q70EK9 711 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 RBM12BQ8IXT5 1001 aaKnown RBP14.9□□□□□ -0.02
SNX13-204ENST00000444712 MMP21Q8N119 569 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 NT5CQ8TCD5 201 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 EXOSC8Q96B26 276 aaKnown RBP14.9□□□□□ -0.02
SNX13-204ENST00000444712 TRIM4Q9C037 500 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 CXorf36Q9H7Y0 433 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 PRDM7Q9NQW5 492 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 TEX10Q9NXF1 929 aaPredicted RBP14.9□□□□□ -0.02
SNX13-204ENST00000444712 UTS2RQ9UKP6 389 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 PNMA8BQ9ULN7 279 aaPredicted RBP14.9□□□□□ -0.02
SNX13-204ENST00000444712 PADI2Q9Y2J8 665 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 MAP4K5Q9Y4K4 846 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 PCDHGB5Q9Y5G0 923 aa14.9□□□□□ -0.02
SNX13-204ENST00000444712 OR2A25A4D2G3 310 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 VGLL3A8MV65 326 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 SLC35G6P0C7Q6 338 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 PABPC4LP0CB38 370 aaKnown RBP14.89□□□□□ -0.03
SNX13-204ENST00000444712 CTSEP14091 401 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 FPR1P21462 350 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 ATP5A1P25705 553 aaKnown RBP14.89□□□□□ -0.03
SNX13-204ENST00000444712 DNAJA1P31689 397 aaKnown RBP14.89□□□□□ -0.03
SNX13-204ENST00000444712 NR1H2P55055 460 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 TUBA4AP68366 448 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 SLAMF1Q13291 335 aa14.89□□□□□ -0.03
SNX13-204ENST00000444712 C16orf72Q14CZ0 275 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms