RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZDHHC2Q9UIJ5 367 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 FIS1Q9Y3D6 152 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 CCL27Q9Y4X3 112 aa15.1■□□□□ 0.01
USP39-205ENST00000442708 A0A088AWK7 358 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 HMGB1P1B2RPK0 211 aaPredicted RBP15.09■□□□□ 0.01
USP39-205ENST00000442708 H3BQF6 201 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 ALOX12BO75342 701 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 HEXBP07686 556 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 FGF4P08620 206 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 HSD3B1P14060 373 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 ZNF10P21506 573 aaPredicted RBP15.09■□□□□ 0.01
USP39-205ENST00000442708 IL10P22301 178 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 HSD3B2P26439 372 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 TPP2P29144 1249 aaPredicted RBP15.09■□□□□ 0.01
USP39-205ENST00000442708 SERPINB5P36952 375 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 ARFIP1P53367 373 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 HNRNPH2P55795 449 aaKnown RBP15.09■□□□□ 0.01
USP39-205ENST00000442708 RAB38P57729 211 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 ABCE1P61221 599 aaKnown RBP15.09■□□□□ 0.01
USP39-205ENST00000442708 MINDY4Q4G0A6 757 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 MFSD4BQ5TF39 518 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 CPZQ66K79 652 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 MRM1Q6IN84 353 aaKnown RBP15.09■□□□□ 0.01
USP39-205ENST00000442708 KIRREL2Q6UWL6 708 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 LANCL3Q6ZV70 420 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 COMMD6Q7Z4G1 85 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 PPP1R14CQ8TAE6 165 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 CHTF18Q8WVB6 975 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 SREK1Q8WXA9 508 aaKnown RBP15.09■□□□□ 0.01
USP39-205ENST00000442708 TSLPQ969D9 159 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 UCN3Q969E3 161 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 SORT1Q99523 831 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 ROGDIQ9GZN7 287 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 LYRM4Q9HD34 91 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 SEMA3GQ9NS98 782 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 NKIRAS1Q9NYS0 192 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 VPS29Q9UBQ0 182 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 FBXW2Q9UKT8 454 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 TRAF6Q9Y4K3 522 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 ASB4Q9Y574 426 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 DNAJC15Q9Y5T4 150 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 KCNMB2Q9Y691 235 aa15.09■□□□□ 0.01
USP39-205ENST00000442708 IGSF10Q6WRI0 2623 aa15.08■□□□□ 0
USP39-205ENST00000442708 TMEM114B3SHH9 223 aa15.08■□□□□ 0
USP39-205ENST00000442708 TGFBR3LH3BV60 316 aa15.08■□□□□ 0
USP39-205ENST00000442708 PRKRAO75569 313 aaKnown RBP15.08■□□□□ 0
USP39-205ENST00000442708 CRCPO75575 148 aa15.08■□□□□ 0
USP39-205ENST00000442708 KLK1P06870 262 aa15.08■□□□□ 0
USP39-205ENST00000442708 MAOAP21397 527 aa15.08■□□□□ 0
USP39-205ENST00000442708 TSFMP43897 325 aaKnown RBP15.08■□□□□ 0
USP39-205ENST00000442708 RAE1P78406 368 aaKnown RBP15.08■□□□□ 0
USP39-205ENST00000442708 ZNF33BQ06732 778 aa15.08■□□□□ 0
USP39-205ENST00000442708 BST1Q10588 318 aa15.08■□□□□ 0
USP39-205ENST00000442708 CHAF1BQ13112 559 aa15.08■□□□□ 0
USP39-205ENST00000442708 LINC00303Q3SY05 128 aa15.08■□□□□ 0
USP39-205ENST00000442708 TUBB8Q3ZCM7 444 aa15.08■□□□□ 0
USP39-205ENST00000442708 SH2D4BQ5SQS7 431 aa15.08■□□□□ 0
USP39-205ENST00000442708 C18orf63Q68DL7 685 aa15.08■□□□□ 0
USP39-205ENST00000442708 TMEM205Q6UW68 189 aa15.08■□□□□ 0
USP39-205ENST00000442708 MED25Q71SY5 747 aa15.08■□□□□ 0
USP39-205ENST00000442708 TRIM46Q7Z4K8 759 aa15.08■□□□□ 0
USP39-205ENST00000442708 RAB43Q86YS6 212 aa15.08■□□□□ 0
USP39-205ENST00000442708 ZCCHC7Q8N3Z6 543 aaKnown RBP15.08■□□□□ 0
USP39-205ENST00000442708 C1orf52Q8N6N3 182 aaKnown RBP15.08■□□□□ 0
USP39-205ENST00000442708 GOLGA6L1Q8N7Z2 621 aa15.08■□□□□ 0
USP39-205ENST00000442708 OR11G2Q8NGC1 345 aa15.08■□□□□ 0
USP39-205ENST00000442708 OR2T11Q8NH01 316 aa15.08■□□□□ 0
USP39-205ENST00000442708 THAP4Q8WY91 577 aa15.08■□□□□ 0
USP39-205ENST00000442708 TTC9Q92623 222 aa15.08■□□□□ 0
USP39-205ENST00000442708 EXTL1Q92935 676 aa15.08■□□□□ 0
USP39-205ENST00000442708 APIPQ96GX9 242 aa15.08■□□□□ 0
USP39-205ENST00000442708 CENPKQ9BS16 269 aa15.08■□□□□ 0
USP39-205ENST00000442708 EML4Q9HC35 981 aaKnown RBP15.08■□□□□ 0
USP39-205ENST00000442708 NECTIN3Q9NQS3 549 aa15.08■□□□□ 0
USP39-205ENST00000442708 P4HTMQ9NXG6 502 aa15.08■□□□□ 0
USP39-205ENST00000442708 POLHQ9Y253 713 aa15.08■□□□□ 0
USP39-205ENST00000442708 MAN2B2Q9Y2E5 1009 aa15.08■□□□□ 0
USP39-205ENST00000442708 ATG4BQ9Y4P1 393 aa15.08■□□□□ 0
USP39-205ENST00000442708 CLDN16Q9Y5I7 305 aa15.08■□□□□ 0
USP39-205ENST00000442708 IGKV3D-11A0A0A0MRZ8 115 aa15.07■□□□□ 0
USP39-205ENST00000442708 ARGFXA6NJG6 315 aa15.07■□□□□ 0
USP39-205ENST00000442708 WASHC1A8K0Z3 465 aa15.07■□□□□ 0
USP39-205ENST00000442708 HSPA4LO95757 839 aa15.07■□□□□ 0
USP39-205ENST00000442708 FAM58BPP0C7Q3 252 aa15.07■□□□□ 0
USP39-205ENST00000442708 LINC00032P0C843 101 aa15.07■□□□□ 0
USP39-205ENST00000442708 SLC1A6P48664 564 aa15.07■□□□□ 0
USP39-205ENST00000442708 STX3Q13277 289 aa15.07■□□□□ 0
USP39-205ENST00000442708 ANKRD37Q7Z713 158 aa15.07■□□□□ 0
USP39-205ENST00000442708 NUDT13Q86X67 352 aa15.07■□□□□ 0
USP39-205ENST00000442708 SCUBE1Q8IWY4 988 aa15.07■□□□□ 0
USP39-205ENST00000442708 ZNF781Q8N8C0 355 aa15.07■□□□□ 0
USP39-205ENST00000442708 GBP7Q8N8V2 638 aaPredicted RBP15.07■□□□□ 0
USP39-205ENST00000442708 PLPP5Q8NEB5 264 aa15.07■□□□□ 0
USP39-205ENST00000442708 C11orf24Q96F05 449 aaPredicted RBP15.07■□□□□ 0
USP39-205ENST00000442708 TRIM55Q9BYV6 548 aa15.07■□□□□ 0
USP39-205ENST00000442708 FBXL4Q9UKA2 621 aa15.07■□□□□ 0
USP39-205ENST00000442708 LOC102723996A0A087X1L8 192 aa15.06■□□□□ 0
USP39-205ENST00000442708 IGHV3-20A0A0C4DH32 117 aa15.06■□□□□ 0
USP39-205ENST00000442708 MYOCOSA0A1B0GUC4 107 aa15.06■□□□□ 0
USP39-205ENST00000442708 A0A1W2PR48 441 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms