RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZNF595Q8IYB9 648 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 TEX9Q8N6V9 391 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 FAM47BQ8NA70 645 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 UBE2E3Q969T4 207 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 C5orf34Q96MH7 638 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 KCNC2Q96PR1 638 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 HES7Q9BYE0 225 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 TRIM45Q9H8W5 580 aaPredicted RBP17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 ZNF223Q9UK11 482 aaPredicted RBP17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 OSGIN2Q9Y236 505 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 TSC22D4Q9Y3Q8 395 aa17.68■□□□□ 0.42
HMGB3P22-201ENST00000442010 LRRC14BA6NHZ5 514 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 CLDN4O14493 209 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 WISP2O76076 250 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 CRYABP02511 175 aaKnown RBP17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 STSP08842 583 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 ATP5A1P25705 553 aaKnown RBP17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 TPP2P29144 1249 aaPredicted RBP17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 PPP2R1BP30154 601 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 SERPINB1P30740 379 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 PMP22Q01453 160 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 SRSF11Q05519 484 aaKnown RBP17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 TGM3Q08188 693 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 TECRLQ5HYJ1 363 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 ZNF227Q86WZ6 799 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 SRFBP1Q8NEF9 429 aaKnown RBP17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 B3GNT7Q8NFL0 401 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 PAFAH2Q99487 392 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 TBCDQ9BTW9 1192 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 COPS7BQ9H9Q2 264 aaPredicted RBP17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 LYRM4Q9HD34 91 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 ZNF358Q9NW07 568 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 CACNA1DQ01668 2161 aa17.67■□□□□ 0.42
HMGB3P22-201ENST00000442010 ASPDHA6ND91 283 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 KIF2AO00139 706 aaPredicted RBP17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 RTCAO00442 366 aaKnown RBP17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 CTNSO60931 367 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 MYO1DO94832 1006 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 TGFB1P01137 390 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 TRHRP34981 398 aaPredicted RBP17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 KCNK10P57789 538 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 SLC13A2Q13183 592 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 TMEM35AQ53FP2 167 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 LIPJQ5W064 366 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 HIST2H2BCQ6DN03 193 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 KLC3Q6P597 504 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 RNF175Q8N4F7 328 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 ACOT4Q8N9L9 421 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 HUS1BQ8NHY5 278 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 DCAKDQ8WVC6 231 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 MAPKAP1Q9BPZ7 522 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 ROGDIQ9GZN7 287 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 VPS11Q9H270 941 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 PNO1Q9NRX1 252 aaKnown RBP17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 ADGRE2Q9UHX3 823 aa17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 MRPS33Q9Y291 106 aaKnown RBP17.66■□□□□ 0.42
HMGB3P22-201ENST00000442010 LRRTM2O43300 516 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 UGDHO60701 494 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 CLDN1O95832 211 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 INHBAP08476 426 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 PCNAP12004 261 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 GFAPP14136 432 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 HIST1H1TP22492 207 aaPredicted RBP17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 PIK3CBP42338 1070 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 SERPINB9P50453 376 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 CLCN2P51788 898 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 DEPDC1Q5TB30 811 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 KHDRBS2Q5VWX1 349 aaKnown RBP17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 METTL2BQ6P1Q9 378 aaKnown RBP17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 CHSY3Q70JA7 882 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 CLNKQ7Z7G1 428 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 CMTM7Q96FZ5 175 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 DEFB126Q9BYW3 111 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 OR51B5Q9H339 312 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 ADAP2Q9NPF8 381 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 LRFN1Q9P244 771 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 ZNF180Q9UJW8 692 aa17.65■□□□□ 0.42
HMGB3P22-201ENST00000442010 TRBV11-1A0A0K0K1C0 115 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 A1L4Q6 167 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 SYNDIG1LA6NDD5 238 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 H0YIV9 168 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 SH3BGRLO75368 114 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 SIX3O95343 332 aaPredicted RBP17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 SP1P08047 785 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 CD46P15529 392 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 OC90Q02509 493 aaPredicted RBP17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 GTF2H2Q13888 395 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 RCN2Q14257 317 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 SLC25A25Q6KCM7 469 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 GTF2H2CQ6P1K8 395 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 GOLGA7Q7Z5G4 137 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 L3MBTL4Q8NA19 623 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 KIF18AQ8NI77 898 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 NCLNQ969V3 563 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 RELTQ969Z4 430 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 VMP1Q96GC9 406 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 FRMD6Q96NE9 622 aa17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 SORBS1Q9BX66 1292 aaKnown RBP17.64■□□□□ 0.41
HMGB3P22-201ENST00000442010 ZNF717Q9BY31 904 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 413.4 ms