RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 OR5T3Q8NGG3 340 aa17.13■□□□□ 0.33
SMPD4-210ENST00000441135 OR2W6PQ8NHA6 318 aa17.13■□□□□ 0.33
SMPD4-210ENST00000441135 HUS1BQ8NHY5 278 aa17.13■□□□□ 0.33
SMPD4-210ENST00000441135 WDR20Q8TBZ3 569 aa17.13■□□□□ 0.33
SMPD4-210ENST00000441135 BRIX1Q8TDN6 353 aaKnown RBP17.13■□□□□ 0.33
SMPD4-210ENST00000441135 PEX11GQ96HA9 241 aa17.13■□□□□ 0.33
SMPD4-210ENST00000441135 CENPKQ9BS16 269 aa17.13■□□□□ 0.33
SMPD4-210ENST00000441135 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
SMPD4-210ENST00000441135 USP9YO00507 2555 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-210ENST00000441135 DYTNA2CJ06 578 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 PSMD12O00232 456 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-210ENST00000441135 COPEO14579 308 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 PLIN3O60664 434 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 JRKO75564 520 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 UQCRHP07919 91 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 KRT4P19013 534 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 EFNA3P52797 238 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 BTN3A2P78410 334 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 ARG2P78540 354 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 MRPL49Q13405 166 aaKnown RBP17.12■□□□□ 0.33
SMPD4-210ENST00000441135 CUL3Q13618 768 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 NR6A1Q15406 480 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 ZYG11AQ6WRX3 759 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 MYLK4Q86YV6 388 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-210ENST00000441135 CA13Q8N1Q1 262 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 PSMF1Q92530 271 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 IMMP1LQ96LU5 166 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 NSUN5Q96P11 429 aaKnown RBP17.12■□□□□ 0.33
SMPD4-210ENST00000441135 TMEM237Q96Q45 408 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 F2RL3Q96RI0 385 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 COPS7BQ9H9Q2 264 aaPredicted RBP17.12■□□□□ 0.33
SMPD4-210ENST00000441135 LYRM4Q9HD34 91 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 PRDM7Q9NQW5 492 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 PTGFRNQ9P2B2 879 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 TRPS1Q9UHF7 1281 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 RNF11Q9Y3C5 154 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 MMACHCQ9Y4U1 282 aa17.12■□□□□ 0.33
SMPD4-210ENST00000441135 TLDC2A0PJX2 215 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 H3BQF6 201 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 SEMA3DO95025 777 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 MLYCDO95822 493 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 B3GALT4O96024 378 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 PTX3P26022 381 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-210ENST00000441135 PLA2G16P53816 162 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 RAB38P57729 211 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 DNAJB13P59910 316 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 CLCQ05315 142 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
SMPD4-210ENST00000441135 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMPD4-210ENST00000441135 UNC50Q53HI1 259 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 FRG2Q64ET8 278 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 CPEB2Q7Z5Q1 589 aaKnown RBP17.11■□□□□ 0.33
SMPD4-210ENST00000441135 UBE3DQ7Z6J8 389 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 MILR1Q7Z6M3 343 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 PSMG3-AS1Q96PY0 264 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 FRG2BQ96QU4 278 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 ZNF382Q96SR6 550 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 SEMA4BQ9NPR2 832 aaPredicted RBP17.11■□□□□ 0.33
SMPD4-210ENST00000441135 SENP1Q9P0U3 644 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 MRPS33Q9Y291 106 aaKnown RBP17.11■□□□□ 0.33
SMPD4-210ENST00000441135 DOCK10Q96BY6 2186 aa17.11■□□□□ 0.33
SMPD4-210ENST00000441135 SPTAN1Q13813 2472 aaKnown RBP17.1■□□□□ 0.33
SMPD4-210ENST00000441135 BLACEA4D250 179 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 ANKUB1A6NFN9 424 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 G3V2L1 256 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 SUPT7LO94864 414 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 CBX6O95503 412 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 TGFB1P01137 390 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 MYL2P10916 166 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 GP1BBP13224 206 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 HIST1H1TP22492 207 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-210ENST00000441135 OLR1P78380 273 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 RUNX2Q13950 521 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 ELOAQ14241 798 aaKnown RBP17.1■□□□□ 0.33
SMPD4-210ENST00000441135 PLAG1Q6DJT9 500 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 ANKRD37Q7Z713 158 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 CROCCP2Q86T23 111 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 ZCCHC7Q8N3Z6 543 aaKnown RBP17.1■□□□□ 0.33
SMPD4-210ENST00000441135 SIRT6Q8N6T7 355 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 C7orf57Q8NEG2 295 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 OR4F6Q8NGB9 312 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 SSC4DQ8WTU2 575 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 RGMAQ96B86 450 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 APOPT1Q96IL0 206 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 RNF32Q9H0A6 362 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 PRDM9Q9NQV7 894 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 TEKT2Q9UIF3 430 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 DAPP1Q9UN19 280 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 NTNG1Q9Y2I2 539 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 MAST4O15021 2626 aa17.1■□□□□ 0.33
SMPD4-210ENST00000441135 IGKV3D-11A0A0A0MRZ8 115 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 TRAV17A0A0B4J275 112 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 FOXO6A8MYZ6 492 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 DNAJB6O75190 326 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-210ENST00000441135 CELA2AP08217 269 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ITGAMP11215 1152 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ATP5A1P25705 553 aaKnown RBP17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ARL1P40616 181 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-210ENST00000441135 PKNOX1P55347 436 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms