RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 LCTLQ6UWM7 567 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 BTNL8Q6UX41 500 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SIGLEC15Q6ZMC9 328 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC39A5Q6ZMH5 540 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC16A9Q7RTY1 509 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 HAPLN4Q86UW8 402 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 LONP2Q86WA8 852 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZC3HC1Q86WB0 502 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 STX12Q86Y82 276 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CCDC36Q8IYA8 594 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ST13P4Q8IZP2 240 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ARHGAP24Q8N264 748 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 GTPBP8Q8N3Z3 284 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ICA1LQ8NDH6 482 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR7G1Q8NGA0 311 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR52L2PQ8NGH6 319 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 WDR20Q8TBZ3 569 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRMT10AQ8TBZ6 339 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 LPAR1Q92633 364 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 RFT1Q96AA3 541 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 OPTNQ96CV9 577 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF48Q96MX3 618 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 FOXN4Q96NZ1 517 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CASD1Q96PB1 797 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 DUX5Q96PT3 197 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLITRK1Q96PX8 696 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 FYTTD1Q96QD9 318 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SIN3AQ96ST3 1273 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 MTERF1Q99551 399 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 MXRA8Q9BRK3 442 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM246Q9BRR3 403 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 IL22Q9GZX6 179 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CATSPERBQ9H7T0 1116 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CHMP1AQ9HD42 196 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 BPIFA1Q9NP55 256 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 MRPL17Q9NRX2 175 aaKnown RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZFP57Q9NU63 452 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM74BQ9NUR3 256 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 OSER1Q9NX31 292 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 MTCH1Q9NZJ7 389 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 NKX1-2Q9UD57 310 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 KCNE5Q9UJ90 142 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 TTC7AQ9ULT0 858 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 B9D1Q9UPM9 204 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 SATB2Q9UPW6 733 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CA5BQ9Y2D0 317 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 KLF2Q9Y5W3 355 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 CEPT1Q9Y6K0 416 aa3.41□□□□□ -1.86
HMGB1P12-201ENST00000438594 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCDC162PA2VCL2 907 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CPED1A4D0V7 1026 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PPIAL4DF5H284 164 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TEX46H3BTG2 121 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 WWP2O00308 870 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 FPGTO14772 594 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 HAT1O14929 419 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 DSCR3O14972 297 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSMD3O43242 534 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 BUD23O43709 281 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 JAK2O60674 1132 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SCN2BO60939 215 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 GLRA3O75311 464 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 BCAS1O75363 584 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 NEBLO76041 1014 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PDE5AO76074 875 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCNB2O95067 398 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 GH2P01242 217 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PRKCGP05129 697 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CRYGBP07316 175 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ALOX5P09917 674 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 NUDT17P0C025 328 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CBSLP0DN79 551 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 MCF2P10911 925 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 NQO2P16083 231 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 HOXB8P17481 243 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 HOXB9P17482 250 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 MPZP25189 248 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPP4P27487 766 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PIK3R1P27986 724 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 OXTRP30559 389 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CBSP35520 551 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TUFMP49411 452 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCL11P51671 97 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CLCN5P51795 746 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 MTCP1P56278 107 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC37A1P57057 533 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TNNC1P63316 161 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 DLK1P80370 383 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PIGFQ07326 219 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZFP36L1Q07352 338 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 FGL1Q08830 312 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 HYAL1Q12794 435 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 DNASE1L3Q13609 305 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 FHL1Q13642 323 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ME3Q16798 604 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ST3GAL2Q16842 350 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PNLIPRP3Q17RR3 467 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM44Q2T9K0 475 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM31Q5JXX7 168 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDKL4Q5MAI5 379 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms