RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 A0A1W2PR48 441 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 DCDC2BA2VCK2 349 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC28A1O00337 649 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 FOXS1O43638 330 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ERAL1O75616 437 aaKnown RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC22A3O75751 556 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR2B3O76000 313 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZBTB11O95625 1053 aaPredicted RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 COX4I1P13073 169 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ANPEPP15144 967 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ITGAXP20702 1163 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 NUDT2P50583 147 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ABATP80404 500 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SHC2P98077 582 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 EMX2Q04743 252 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC14A1Q13336 389 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 TRIP6Q15654 476 aaKnown RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 FAAH2Q6GMR7 532 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR4C11Q6IEV9 310 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 METTL2BQ6P1Q9 378 aaKnown RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 KBTBD2Q8IY47 623 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 C16orf78Q8WTQ4 265 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 TM4SF19Q96DZ7 209 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 FAR2Q96K12 515 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC6A16Q9GZN6 736 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC52A3Q9NQ40 469 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SDR39U1Q9NRG7 319 aaPredicted RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ACSL6Q9UKU0 697 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 EFCAB7A8K855 629 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 H3BMH7 237 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 FLRT2O43155 660 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF749O43361 778 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 KDM1AO60341 852 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 FKBP6O75344 327 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PDE5AO76074 875 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC34A2O95436 690 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC35G6P0C7Q6 338 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 THRAP10827 490 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 ATP5A1P25705 553 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PTX3P26022 381 aaPredicted RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 TIA1P31483 386 aaKnown RBP eCLIP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 FEN1P39748 380 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 GPR3P46089 330 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAPK12P53778 367 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAPK10P53779 464 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 RPS15AP62244 130 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 BTG2P78543 158 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 HSD11B2P80365 405 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 C2orf80Q0P641 193 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 SELPLGQ14242 412 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 VWA2Q5GFL6 755 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 TMEM71Q6P5X7 295 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 AAGABQ6PD74 315 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 KLHL35Q6PF15 583 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 RNF44Q7L0R7 432 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 OLIG3Q7RTU3 272 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF551Q7Z340 670 aaPredicted RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 RABEPKQ7Z6M1 372 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 TICAM1Q8IUC6 712 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLITRK4Q8IW52 837 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 MIER2Q8N344 545 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 METTL4Q8N3J2 472 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 DNAJB14Q8TBM8 379 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZFPM2Q8WW38 1151 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZUFSPQ96AP4 578 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PPWD1Q96BP3 646 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 TM4SF18Q96CE8 201 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 MMABQ96EY8 250 aaPredicted RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 CMTM7Q96FZ5 175 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PEX11GQ96HA9 241 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PPP3R2Q96LZ3 170 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZNF184Q99676 751 aaPredicted RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 IKZF5Q9H5V7 419 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAP10Q9P2G4 905 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 NINQ8N4C6 2090 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 FOXE1O00358 373 aaPredicted RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 B4GALT2O60909 372 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 NELFEP18615 380 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 HIST1H1TP22492 207 aaPredicted RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PIK3CBP42338 1070 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 POLR2JP52435 117 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 AP2B1P63010 937 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 GPLD1P80108 840 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 MXRA7P84157 204 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PCDH1Q08174 1060 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 CSTF3Q12996 717 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 LTB4RQ15722 352 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 RABL3Q5HYI8 236 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 C6orf10Q5SRN2 563 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 NDUFAF5Q5TEU4 345 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 TMEM154Q6P9G4 183 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 PGM2L1Q6PCE3 622 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 ARHGAP22Q7Z5H3 698 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 GALNT10Q86SR1 603 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 RBM12BQ8IXT5 1001 aaKnown RBP9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR2L5Q8NG80 312 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 FBXO30Q8TB52 745 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 GATA6Q92908 595 aa9.01□□□□□ -0.97
HMGCLL1-206ENST00000428842 COL26A1Q96A83 441 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms