RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CASP9P55211 416 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 RACK1P63244 317 aaKnown RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 BLMHQ13867 455 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 LRRC23Q53EV4 343 aaPredicted RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 GPR153Q6NV75 609 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 SPESP1Q6UW49 350 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 TMEM26Q6ZUK4 368 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 ASPGQ86U10 573 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 PYURFQ96I23 114 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 VPS50Q96JG6 964 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 RAPGEFL1Q9UHV5 662 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 B4DGG1 531 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 DEAF1O75398 565 aaPredicted RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 PRSS23O95084 383 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 ETFAP13804 333 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 KDELR2P33947 212 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 CHI3L1P36222 383 aaPredicted RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 RAB8AP61006 207 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 HHEXQ03014 270 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 SLC5A12Q1EHB4 618 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 IQCHQ86VS3 1027 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 ZNF761Q86XN6 746 aaPredicted RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 ZCCHC7Q8N3Z6 543 aaKnown RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 OR10Q1Q8NGQ4 319 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 NT5CQ8TCD5 201 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 MAL2Q969L2 176 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 OR2A5Q96R48 311 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 TMEM121BQ9BXQ6 578 aaPredicted RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 KLHL25Q9H0H3 589 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 MIR1-1HGQ9H1L0 117 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 EVA1BQ9NVM1 165 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 HRASLS2Q9NWW9 162 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 TAS2R7Q9NYW3 318 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 ANKMY1Q9P2S6 941 aa25.17■■□□□ 1.62
LDB1-202ENST00000425280 SAMD4AQ9UPU9 718 aaKnown RBP25.17■■□□□ 1.62
LDB1-202ENST00000425280 TLR4O00206 839 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 UPK1AO00322 258 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 TNFRSF21O75509 655 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 NME1P15531 152 aaKnown RBP25.16■■□□□ 1.62
LDB1-202ENST00000425280 UQCRC2P22695 453 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 LSSP48449 732 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 MANFP55145 182 aaKnown RBP25.16■■□□□ 1.62
LDB1-202ENST00000425280 PDK3Q15120 406 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 GALNT10Q86SR1 603 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 KCT2Q8NC54 265 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 HSPA12BQ96MM6 686 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 EPS8L2Q9H6S3 715 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 TM9SF3Q9HD45 589 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 PILRAQ9UKJ1 303 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 FAF1Q9UNN5 650 aaPredicted RBP25.16■■□□□ 1.62
LDB1-202ENST00000425280 KLK4Q9Y5K2 254 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 SNX11Q9Y5W9 270 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 RASAL1O95294 804 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 CERS1P27544 350 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 PCGF2P35227 344 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 TSFMP43897 325 aaKnown RBP25.16■■□□□ 1.62
LDB1-202ENST00000425280 RPS9P46781 194 aaKnown RBP25.16■■□□□ 1.62
LDB1-202ENST00000425280 RGS1Q08116 209 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 MARVELD2Q8N4S9 558 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 TM4SF19Q96DZ7 209 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 FAIM2Q9BWQ8 316 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 ZNF639Q9UID6 485 aa25.16■■□□□ 1.62
LDB1-202ENST00000425280 KNL1Q8NG31 2342 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 DNAH14Q0VDD8 3507 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 MAGEA13PA6NCF6 341 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 C19orf67A6NJJ6 358 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 ZNF682O95780 498 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 DCNP07585 359 aaKnown RBP25.15■■□□□ 1.62
LDB1-202ENST00000425280 DGLUCYQ7Z3D6 616 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 RNF130Q86XS8 419 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 UBALD2Q8IYN6 164 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 C11orf65Q8NCR3 313 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 EHD3Q9NZN3 535 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 MAP4K5Q9Y4K4 846 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 ATG4BQ9Y4P1 393 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 SNX8Q9Y5X2 465 aa25.15■■□□□ 1.62
LDB1-202ENST00000425280 A0A0J9YVX5 310 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 RNF103-CHMP3A0A140T963 221 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 A0A1W2PR48 441 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 PRKRAO75569 313 aaKnown RBP25.14■■□□□ 1.62
LDB1-202ENST00000425280 KRT75O95678 551 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 PVRP15151 417 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 MRPS35P82673 323 aaKnown RBP25.14■■□□□ 1.62
LDB1-202ENST00000425280 TGM3Q08188 693 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 FADDQ13158 208 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 RBM12BQ8IXT5 1001 aaKnown RBP25.14■■□□□ 1.62
LDB1-202ENST00000425280 GAL3ST3Q96A11 431 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 OSBPL11Q9BXB4 747 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 NLNQ9BYT8 704 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 C1GALT1Q9NS00 363 aa25.14■■□□□ 1.62
LDB1-202ENST00000425280 LYNP07948 512 aa25.14■■□□□ 1.61
LDB1-202ENST00000425280 HOXB6P17509 224 aaKnown RBP25.14■■□□□ 1.61
LDB1-202ENST00000425280 BCKDHBP21953 392 aa25.14■■□□□ 1.61
LDB1-202ENST00000425280 ELOCQ15369 112 aa25.14■■□□□ 1.61
LDB1-202ENST00000425280 GCNT6Q5T4J0 391 aa25.14■■□□□ 1.61
LDB1-202ENST00000425280 ZBED6CLQ96FA7 236 aaPredicted RBP25.14■■□□□ 1.61
LDB1-202ENST00000425280 SPACA7Q96KW9 195 aa25.14■■□□□ 1.61
LDB1-202ENST00000425280 RAD21L1Q9H4I0 556 aa25.14■■□□□ 1.61
LDB1-202ENST00000425280 C8orf4Q9NR00 106 aa25.14■■□□□ 1.61
LDB1-202ENST00000425280 ACSS1Q9NUB1 689 aaPredicted RBP25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms