RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CRABP2P29373 138 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 CA7P43166 264 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 MTTPP55157 894 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 TAS2R50P59544 299 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 SLC25A25Q6KCM7 469 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 TRIM40Q6P9F5 258 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 RNF175Q8N4F7 328 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 KCTD4Q8WVF5 259 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 FAR2Q96K12 515 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 NMRAL1Q9HBL8 299 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 NINJ2Q9NZG7 142 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 LRFN1Q9P244 771 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF835Q9Y2P0 537 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF407Q9C0G0 2248 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 DCHS2Q6V1P9 2916 aa10.3□□□□□ -0.76
SSBP3-206ENST00000420121 MYO9AB2RTY4 2548 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 TRBV11-1A0A0K0K1C0 115 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 LRRC14BA6NHZ5 514 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 K7EPI3 171 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 RTCAO00442 366 aaKnown RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 KLK8O60259 260 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 SLC25A12O75746 678 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 SCELO95171 688 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ALDOAP04075 364 aaKnown RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 MYBL2P10244 700 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 CD46P15529 392 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 EEF1DP29692 281 aaKnown RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ECHS1P30084 290 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 MSH2P43246 934 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 HLCSP50747 726 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 PER3P56645 1201 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 OC90Q02509 493 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 IRF8Q02556 426 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 LAPTM5Q13571 262 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 NAA30Q147X3 362 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 C8orf74Q6P047 294 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 RAPH1Q70E73 1250 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 CLNKQ7Z7G1 428 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 TBC1D1Q86TI0 1168 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 RELL1Q8IUW5 271 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF595Q8IYB9 648 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 CPSF7Q8N684 471 aaKnown RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 TMEM178AQ8NBL3 297 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ARMC2Q8NEN0 867 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 OR7G3Q8NG95 312 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 RHEBL1Q8TAI7 183 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ADAMTS18Q8TE60 1221 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 THAP3Q8WTV1 239 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ITLN2Q8WWU7 325 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 NCLNQ969V3 563 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 CCDC120Q96HB5 630 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 GPR137Q96N19 417 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 MAPKAP1Q9BPZ7 522 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 FUT8Q9BYC5 575 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 DEFB126Q9BYW3 111 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 TSPAN10Q9H1Z9 355 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ACSS3Q9H6R3 686 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ADAP2Q9NPF8 381 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 SNX15Q9NRS6 342 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 PNO1Q9NRX1 252 aaKnown RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 DMGDHQ9UI17 866 aaKnown RBP10.29□□□□□ -0.76
SSBP3-206ENST00000420121 ACOT9Q9Y305 439 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 CSMD1Q96PZ7 3565 aa10.29□□□□□ -0.76
SSBP3-206ENST00000420121 DNAJC13O75165 2243 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 MYOCOSA0A1B0GUC4 107 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 SUPT3HB4E1H0 165 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ZNHIT1O43257 154 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 SLC19A2O60779 497 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 CTNSO60931 367 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 SUPT3HO75486 399 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 S100BP04271 92 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ATP5A1P25705 553 aaKnown RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 MAGEA12P43365 314 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 CYB561P49447 251 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 CLCN2P51788 898 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ADORA2A-AS1P86434 159 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 CKAP4Q07065 602 aaKnown RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 SLC13A2Q13183 592 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 SETDB1Q15047 1291 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ELAVL1Q15717 326 aaKnown RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 C3AR1Q16581 482 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 PAGE2BQ5JRK9 111 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 MROH9Q5TGP6 573 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 GRHL2Q6ISB3 625 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 C16orf47Q6ZP98 133 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 Q6ZPB1 254 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 FGD2Q7Z6J4 655 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 PLD6Q8N2A8 252 aaKnown RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 MMGT1Q8N4V1 131 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ZNF321PQ8N8H1 164 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ACOT4Q8N9L9 421 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 NOA1Q8NC60 698 aaKnown RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 PTPMT1Q8WUK0 201 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 ISL2Q96A47 359 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 MRRFQ96E11 262 aaKnown RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 VMP1Q96GC9 406 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 C16orf45Q96MC5 204 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-206ENST00000420121 KCNC2Q96PR1 638 aa10.28□□□□□ -0.76
SSBP3-206ENST00000420121 TBCDQ9BTW9 1192 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms