RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FAM109AQ8N4B1 249 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 SPC24Q8NBT2 197 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 CHDHQ8NE62 594 aaPredicted RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 TRIM58Q8NG06 486 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 PTPMT1Q8WUK0 201 aaPredicted RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 SCYL1Q96KG9 808 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 FAM173AQ9BQD7 235 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 CCDC77Q9BR77 488 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 LIME1Q9H400 295 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 LIN28AQ9H9Z2 209 aaKnown RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 IL1RL2Q9HB29 575 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 DNAJB12Q9NXW2 375 aaKnown RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 ST6GALNAC2Q9UJ37 374 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 ERVK-11Q9UQG0 969 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 SLC22A14Q9Y267 594 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 RPH3AQ9Y2J0 694 aaPredicted RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 KCNE2Q9Y6J6 123 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 LRIT2A6NDA9 550 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 G3V3Y1 287 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 SUSD5O60279 629 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 WDR1O75083 606 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CELA3AP09093 270 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF37AP17032 561 aaPredicted RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 ENDOUP21128 410 aaKnown RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CNR1P21554 472 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 MAGEA5P43359 124 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 HK2P52789 917 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CCZ1BP86790 482 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CCZ1P86791 482 aaPredicted RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CDKL1Q00532 357 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 RBBP5Q15291 538 aaKnown RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF750Q32MQ0 723 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 SLC25A35Q3KQZ1 300 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 SPANXN3Q5MJ09 141 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 TEDDM1Q5T9Z0 273 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF585AQ6P3V2 769 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 HSDL2Q6YN16 418 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 SLCO4C1Q6ZQN7 724 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 GK5Q6ZS86 529 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 VN1R5Q7Z5H4 357 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 IGDCC3Q8IVU1 814 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 PPIL6Q8IXY8 311 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 MMP21Q8N119 569 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF321PQ8N8H1 164 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 FAM47BQ8NA70 645 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 GOLM1Q8NBJ4 401 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 MYRIPQ8NFW9 859 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 OR8K3Q8NH51 312 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 ASB15Q8WXK1 588 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 MAGOHBQ96A72 148 aaKnown RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CERS2Q96G23 380 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CSF3RQ99062 836 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 SH2D2AQ9NP31 389 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 LZTFL1Q9NQ48 299 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 RASSF1Q9NS23 344 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 VTI1BQ9UEU0 232 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 CORO1CQ9ULV4 474 aaPredicted RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 VWA7Q9Y334 891 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 DYRK1BQ9Y463 629 aa11.26□□□□□ -0.61
LIMS2-210ENST00000413578 PHF3Q92576 2039 aaKnown RBP11.26□□□□□ -0.61
LIMS2-210ENST00000413578 A0A0G2JN53 185 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 WWP2O00308 870 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 CLDN4O14493 209 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 ERI3O43414 337 aaKnown RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 NRDCO43847 1150 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 BANF1O75531 89 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 FAM155BO75949 473 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 GSTM2P28161 218 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 SLC6A12P48065 614 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 LIM2P55344 173 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 SLC13A2Q13183 592 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 RIPPLY2Q5TAB7 128 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 FAM45BPQ6NSW5 357 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 ABHD17CQ6PCB6 329 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 ADGRD1Q6QNK2 874 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 ARSKQ6UWY0 536 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 RTL4Q6ZR62 310 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 SEM1Q6ZVN7 128 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 TMEM132CQ8N3T6 1108 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 GPATCH11Q8N954 259 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 MORN4Q8NDC4 146 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 TTLQ8NG68 377 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 OR10Q1Q8NGQ4 319 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 GABPB2Q8TAK5 448 aaPredicted RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 FAM45AQ8TCE6 357 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 ANKRD7Q92527 254 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 DAZLQ92904 295 aaKnown RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 FAR2Q96K12 515 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 SGCZQ96LD1 299 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 ALPK1Q96QP1 1244 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 GPATCH1Q9BRR8 931 aaKnown RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 WDR83Q9BRX9 315 aaKnown RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 POLDIP3Q9BY77 421 aaKnown RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms