RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SRPX2O60687 465 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 GALR3O60755 368 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 GUCY1B2O75343 617 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ERN1O75460 977 aaKnown RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 PRKRAO75569 313 aaKnown RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 CIB2O75838 187 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SORBS2O94875 1100 aaKnown RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 CPNE6O95741 557 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 AIFM1O95831 613 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ANKRD34CP0C6C1 535 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 NR2F6P10588 404 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 DRD2P14416 443 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 DDX5P17844 614 aaKnown RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 ALOX12P18054 663 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 IL1RNP18510 177 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 NELFEP18615 380 aaKnown RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 EFNA1P20827 205 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 ZNF10P21506 573 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 PTPN6P29350 595 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ALDH9A1P49189 494 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SEPHS1P49903 392 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 DUSP3P51452 185 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 MTPNP58546 118 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 CCL7P80098 99 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 HSD11B2P80365 405 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 PLIN5Q00G26 463 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 TNFRSF17Q02223 184 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 TCF15Q12870 199 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 GAB1Q13480 694 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SELPLGQ14242 412 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 KCNAB1Q14722 419 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 PRSS53Q2L4Q9 553 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 MPEG1Q2M385 716 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 GTDC1Q4AE62 458 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 RABL3Q5HYI8 236 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SAMD4BQ5PRF9 694 aaKnown RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 WASHC2DQ5SRD0 308 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 NDUFAF5Q5TEU4 345 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ANXA8L1Q5VT79 327 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 NANOGP8Q6NSW7 305 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 TMEM71Q6P5X7 295 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 CYB5D1Q6P9G0 228 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 DBX2Q6ZNG2 339 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 USP53Q70EK8 1073 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 NET1Q7Z628 596 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 SLC15A3Q8IY34 581 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 CLECL1Q8IZS7 167 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 RNF148Q8N7C7 305 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 FAM47BQ8NA70 645 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 PRSS33Q8NF86 280 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 OR4D9Q8NGE8 314 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 OR8J3Q8NGG0 315 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 DNAJB14Q8TBM8 379 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 CIDECQ96AQ7 238 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 MIEF2Q96C03 454 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 C10orf90Q96M02 699 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ANKRD27Q96NW4 1050 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 PANX1Q96RD7 426 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SERINC2Q96SA4 455 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 DPYSL5Q9BPU6 564 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 MAPKAP1Q9BPZ7 522 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 CPPED1Q9BRF8 314 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 INPP5KQ9BT40 448 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 FAIM2Q9BWQ8 316 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 LRRN3Q9H3W5 708 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 DENND2DQ9H6A0 471 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 SYNDIG1Q9H7V2 258 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 NANOGQ9H9S0 305 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ENAMQ9NRM1 1142 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SLC6A13Q9NSD5 602 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 CMTM6Q9NX76 183 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SLC25A37Q9NYZ2 338 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 EHD3Q9NZN3 535 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 VAPAQ9P0L0 249 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SH3BP4Q9P0V3 963 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 C5AR2Q9P296 337 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SUCOQ9UBS9 1254 aaKnown RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 PHF11Q9UIL8 331 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 PACSIN3Q9UKS6 424 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 FBXW2Q9UKT8 454 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ATXN7L1Q9ULK2 861 aaPredicted RBP6.3□□□□□ -1.4
VPS41-204ENST00000413141 NAALAD2Q9Y3Q0 740 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 ATG4BQ9Y4P1 393 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 PCDHB14Q9Y5E9 798 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 PCDHA9Q9Y5H5 950 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 SLC22A7Q9Y694 548 aa6.3□□□□□ -1.4
VPS41-204ENST00000413141 A0A0C4DFX4 3053 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 WDFY4Q6ZS81 3184 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ARID1BQ8NFD5 2236 aaPredicted RBP6.29□□□□□ -1.4
VPS41-204ENST00000413141 PRSS51A0A1B0GVH4 220 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 A0A1W2PR48 441 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 C1orf226A1L170 272 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 FITM1A5D6W6 292 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 ZNF860A6NHJ4 632 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 TMEM150CB9EJG8 249 aa6.29□□□□□ -1.4
VPS41-204ENST00000413141 D6RAR5 112 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms