RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TOX3O15405 576 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 PSMD3O43242 534 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 TBX1O43435 398 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 LDB2O43679 373 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ITM2AO43736 263 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 KRT38O76015 456 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 BMP10O95393 424 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 METTL18O95568 372 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 POLBP06746 335 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 RALBP11234 206 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 TPH1P17752 444 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ITGALP20701 1170 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 MC4RP32245 332 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 RPL22P35268 128 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 HADHAP40939 763 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 CAPZBP47756 277 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 LEPRP48357 1165 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 VPS41P49754 854 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF140P52738 457 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 TMPRSS15P98073 1019 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 FOXM1Q08050 763 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 DBPQ10586 325 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 BST1Q10588 318 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SF3A3Q12874 501 aaKnown RBP eCLIP5.08□□□□□ -1.64e-6■■□□□ 11.7
LINC00342-201ENST00000412393 DLG1Q12959 904 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 STX3Q13277 289 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 NAB1Q13506 487 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 GPR18Q14330 331 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 FRG1Q14331 258 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 FASTKD3Q14CZ7 662 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 HERC3Q15034 1050 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 RPE65Q16518 533 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF829Q3KNS6 432 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 GPR33Q49SQ1 333 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 NADK2Q4G0N4 442 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 BCL7AQ4VC05 210 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ZRANB3Q5FWF4 1079 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 CACHD1Q5VU97 1274 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 METRNLQ641Q3 311 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 KCTD11Q693B1 232 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 KLHL35Q6PF15 583 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 FAM83HQ6ZRV2 1179 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 GSTA5Q7RTV2 222 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SNX20Q7Z614 316 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SATL1Q86VE3 508 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 WDR75Q8IWA0 830 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 NXPE1Q8N323 547 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 CPSF7Q8N684 471 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 GPR150Q8NGU9 434 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ZNF420Q8TAQ5 688 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 HEXDCQ8WVB3 486 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 RSC1A1Q92681 617 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 EFHD2Q96C19 240 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 MED8Q96G25 268 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ZDHHC12Q96GR4 267 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SERPINI1Q99574 410 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 CGREF1Q99674 301 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 C19orf43Q9BQ61 176 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 WDR83Q9BRX9 315 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ZPBPQ9BS86 351 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 TMEM121Q9BTD3 319 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 YTHDF1Q9BYJ9 559 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SPRY4Q9C004 299 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SEMA4CQ9C0C4 833 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 RAB33BQ9H082 229 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 LRRC40Q9H9A6 602 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 VPS37BQ9H9H4 285 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 APMAPQ9HDC9 416 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 IMP3Q9NV31 184 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SIDT1Q9NXL6 827 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 SPATA7Q9P0W8 599 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 EPHA6Q9UF33 1036 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 CRLS1Q9UJA2 301 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 PILRAQ9UKJ1 303 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ACSL5Q9ULC5 683 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 TMEM184BQ9Y519 407 aaPredicted RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 CFAP20Q9Y6A4 193 aaKnown RBP5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ANKRD12Q6UB98 2062 aa5.08□□□□□ -1.6
LINC00342-201ENST00000412393 ATMQ13315 3056 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 C15orf38-AP3S2A0A0A6YYH1 394 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 TRBV5-4A0A0C4DH59 114 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 LOC101059948A0A1B0GTJ6 334 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 PRSS51A0A1B0GVH4 220 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 TCRBV9S1A1TA0A576 114 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 CCDC78A2IDD5 438 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 FAM159BA6NKW6 160 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 AGAP14A8MT82 685 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 H7C0S8 307 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 CCL22O00626 93 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 COPEO14579 308 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 HNRNPRO43390 633 aaKnown RBP5.07□□□□□ -1.6
LINC00342-201ENST00000412393 SGTAO43765 313 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 SERPINB7O75635 380 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 STK17BO94768 372 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 AP2A1O95782 977 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 NUDT3O95989 172 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 INHBAP08476 426 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 FAM58BPP0C7Q3 252 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 SLC35G4P0C7Q5 338 aa5.07□□□□□ -1.6
LINC00342-201ENST00000412393 MTHFD1P11586 935 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms