RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 RAI1Q7Z5J4 1906 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 A0A087WXM4 84 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 AGAP5A6NIR3 686 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 E2F3O00716 465 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 POLR1CO15160 346 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PIP5K1CO60331 668 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 KDM1AO60341 852 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 GMDSO60547 372 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 IGSF6O95976 241 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZNF12P17014 697 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 FUT1P19526 365 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ITPKBP27987 946 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 SLC6A4P31645 630 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CAPGP40121 348 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 SRSF3P84103 164 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 KYAT1Q16773 422 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 AP5B1Q2VPB7 878 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZNF805Q5CZA5 627 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CACHD1Q5VU97 1274 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 MAMDC2Q7Z304 686 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 SLC30A8Q8IWU4 369 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CLECL1Q8IZS7 167 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 GPD1LQ8N335 351 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 C9orf62Q8N4C0 152 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ASCC1Q8N9N2 400 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZNF485Q8NCK3 441 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZNF680Q8NEM1 530 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 OR52J3Q8NH60 311 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 SLC5A11Q8WWX8 675 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 GTPBP3Q969Y2 492 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZFYVE19Q96K21 471 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZNF560Q96MR9 790 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 FAM129BQ96TA1 746 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 FEVQ99581 238 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PYM1Q9BRP8 204 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TAPBPLQ9BX59 468 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 FAM49AQ9H0Q0 323 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ABCG4Q9H172 646 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 POLR3FQ9H1D9 316 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 RAD21L1Q9H4I0 556 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CRTAC1Q9NQ79 661 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TAS2R9Q9NYW1 312 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 GPR160Q9UJ42 338 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ACSL6Q9UKU0 697 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 NDRG2Q9UN36 371 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 HSPB11Q9Y547 144 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 HSPE1-MOB4S4R3N1 261 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 HCFC1P51610 2035 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TYW5A2RUC4 315 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TMEM200CA6NKL6 621 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PTGESO14684 152 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PPM1BO75688 479 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ATG12O94817 140 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TGFB1P01137 390 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 HSD17B1P14061 328 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CTRB1P17538 263 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 MAP4P27816 1152 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CSTF2P33240 577 aaKnown RBP eCLIP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CDK18Q07002 472 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 GRIK2Q13002 908 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 GAB1Q13480 694 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZNF267Q14586 743 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ABRAXAS2Q15018 415 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TATDN3Q17R31 274 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 EXOC3L2Q2M3D2 409 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 C5orf22Q49AR2 442 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 LIPMQ5VYY2 423 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CTRB2Q6GPI1 263 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CEACAM20Q6UY09 585 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 TIPARPQ7Z3E1 657 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ARMC8Q8IUR7 673 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PPP1R14BQ96C90 147 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ZFRQ96KR1 1074 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 ASB16Q96NS5 453 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 NODALQ96S42 347 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 KCNS3Q9BQ31 491 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PLA2G2FQ9BZM2 168 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 KAT8Q9H7Z6 458 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 EFCAB1Q9HAE3 211 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 SPAG4Q9NPE6 437 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 SEMA4BQ9NPR2 832 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 SETD4Q9NVD3 440 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CFAP97Q9P2B7 532 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 CRNNQ9UBG3 495 aaPredicted RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PRPF19Q9UMS4 504 aaKnown RBP2.97□□□□□ -1.93
RGPD3-202ENST00000409886 PDE10AQ9Y233 779 aa2.97□□□□□ -1.93
RGPD3-202ENST00000409886 IGKV6D-21A0A0A0MT36 114 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 WIPF3A6NGB9 483 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 M0QX08 132 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SULT1C2O00338 296 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 PLK4O00444 970 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 CHP2O43745 196 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 ZNF780AO75290 641 aaPredicted RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SOAT2O75908 522 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 OR4F21O95013 312 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 HSPA4LO95757 839 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 CYP17A1P05093 508 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 HLA-DQB2P05538 268 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 CD72P21854 359 aa2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms