RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DMGDHQ9UI17 866 aaKnown RBP18.01■□□□□ 0.47
SMARCB1-204ENST00000407422 ZNF223Q9UK11 482 aaPredicted RBP18.01■□□□□ 0.47
SMARCB1-204ENST00000407422 LRBAP50851 2863 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 ASPDHA6ND91 283 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 SLC25A12O75746 678 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 PCNAP12004 261 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 DCTP40126 519 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 MAPKAPK3Q16644 382 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 WHAMMP3Q1A5X7 153 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 SLC25A25Q6KCM7 469 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 PNPLA5Q7Z6Z6 429 aaPredicted RBP18■□□□□ 0.47
SMARCB1-204ENST00000407422 ZNF595Q8IYB9 648 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 LAS2Q8IYD9 372 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 ARMC10Q8N2F6 343 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 RNF175Q8N4F7 328 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 HORMAD2Q8N7B1 307 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 TMEM178AQ8NBL3 297 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 NOA1Q8NC60 698 aaKnown RBP18■□□□□ 0.47
SMARCB1-204ENST00000407422 RELTQ969Z4 430 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 FRMD6Q96NE9 622 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 KCNC2Q96PR1 638 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 KCMF1Q9P0J7 381 aa18■□□□□ 0.47
SMARCB1-204ENST00000407422 MRPS33Q9Y291 106 aaKnown RBP18■□□□□ 0.47
SMARCB1-204ENST00000407422 A0A087X1B8 175 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 TRGV8A0A0C4DH27 118 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 SAP18O00422 153 aaKnown RBP17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 TGFB1P01137 390 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 ALDOAP04075 364 aaKnown RBP17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 CYB561P49447 251 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 CLCN2P51788 898 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 GPR143P51810 404 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 TGM3Q08188 693 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 TERF2Q15554 542 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 FAM83EQ2M2I3 478 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 MED27Q6P2C8 311 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 TEX9Q8N6V9 391 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 OR7G3Q8NG95 312 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 RHEBL1Q8TAI7 183 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 ADAMTS18Q8TE60 1221 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 NCLNQ969V3 563 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 MAPKAP1Q9BPZ7 522 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 ACSS3Q9H6R3 686 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 TRIM45Q9H8W5 580 aaPredicted RBP17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 PRM3Q9NNZ6 103 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 SH3BGRL2Q9UJC5 107 aa17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 PPIEQ9UNP9 301 aaKnown RBP17.99■□□□□ 0.47
SMARCB1-204ENST00000407422 A0A096LPK6 155 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 LRRC14BA6NHZ5 514 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 PRKNO60260 465 aaPredicted RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 EPB42P16452 691 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 ATP5A1P25705 553 aaKnown RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 TRHRP34981 398 aaPredicted RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 HLCSP50747 726 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 ALDH6A1Q02252 535 aaKnown RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 PCDH1Q08174 1060 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 PFKFB4Q16877 469 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 ACOT4Q8N9L9 421 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 UBE2E3Q969T4 207 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 GPR78Q96P69 363 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 TBCDQ9BTW9 1192 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 SORBS1Q9BX66 1292 aaKnown RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 FBXW2Q9UKT8 454 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 SYCE1LA8MT33 242 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 NPIPA5E9PKD4 350 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 NME2P1O60361 137 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 CTNSO60931 367 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 KLHL2O95198 593 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 GFAPP14136 432 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 NME2P22392 152 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 PHBP35232 272 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 SETDB1Q15047 1291 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 ACAP2Q15057 778 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 RNFT1Q5M7Z0 435 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 C16orf47Q6ZP98 133 aaPredicted RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 CCDC91Q7Z6B0 441 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 MMGT1Q8N4V1 131 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 SREK1Q8WXA9 508 aaKnown RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 VMP1Q96GC9 406 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 GPR137Q96N19 417 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 OR51B5Q9H339 312 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 CDC42EP4Q9H3Q1 356 aaKnown RBP17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 LYRM4Q9HD34 91 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 ADAP2Q9NPF8 381 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 NPIPA1Q9UND3 350 aa17.98■□□□□ 0.47
SMARCB1-204ENST00000407422 CDK2AP1O14519 115 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 FCHO1O14526 889 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 SLC19A2O60779 497 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 LDB3O75112 727 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 ITGA10O75578 1167 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 ACSL3O95573 720 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 IFNA16P05015 189 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 HIST1H1TP22492 207 aaPredicted RBP17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 TYK2P29597 1187 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 DDX39BQ13838 428 aaKnown RBP17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 TMEM35AQ53FP2 167 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 GRHL2Q6ISB3 625 aa17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 MYLK4Q86YV6 388 aaPredicted RBP17.97■□□□□ 0.47
SMARCB1-204ENST00000407422 RELL1Q8IUW5 271 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms