RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 EXTL2Q9UBQ6 330 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 IFT52Q9Y366 437 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 PCDHGA7Q9Y5G6 932 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 OXSR1O95747 527 aaPredicted RBP12.86□□□□□ -0.35
SNED1-205ENST00000405547 F2P00734 622 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 WASP42768 502 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 GINS1Q14691 196 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 KCT2Q8NC54 265 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 FBXO9Q9UK97 447 aaPredicted RBP12.86□□□□□ -0.35
SNED1-205ENST00000405547 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 CSN2P05814 226 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 GGT1P19440 569 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 ACTC1P68032 377 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 ACTA1P68133 377 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 OR52E8Q6IFG1 317 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 FAM72DQ6L9T8 149 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 FAM72BQ86X60 149 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 SDR39U1Q9NRG7 319 aaPredicted RBP12.86□□□□□ -0.35
SNED1-205ENST00000405547 CLCA3PQ9Y6N3 262 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 A0A1W2PRU2 124 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 HTR1AP08908 422 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 ACRV1P26436 265 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 Q6ZVU0 165 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 C14orf80Q86SX3 495 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 CARM1Q86X55 608 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
SNED1-205ENST00000405547 LHPPQ9H008 270 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 OR51I1Q9H343 314 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 TMEM181Q9P2C4 612 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 PSMD9O00233 223 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 OR4K3Q96R72 315 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 TM9SF2Q99805 663 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 TMEM246Q9BRR3 403 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 HERC2P3Q9BVR0 1158 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 ZFC3H1O60293 1989 aaKnown RBP12.86□□□□□ -0.35
SNED1-205ENST00000405547 GNB5O14775 395 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 ZNF208O43345 1280 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
SNED1-205ENST00000405547 PIGFQ07326 219 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 UPP1Q16831 310 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 TMED4Q7Z7H5 227 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 OR5P2Q8WZ92 322 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
SNED1-205ENST00000405547 LAMP5Q9UJQ1 280 aa12.86□□□□□ -0.35
SNED1-205ENST00000405547 HCRTO43612 131 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 TIA1P31483 386 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNED1-205ENST00000405547 BMXP51813 675 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 GPR17Q13304 367 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 DENND6BQ8NEG7 585 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 CPNE2Q96FN4 548 aaPredicted RBP12.85□□□□□ -0.35
SNED1-205ENST00000405547 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 MT-ND2P03891 347 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 CFL1P23528 166 aaKnown RBP12.85□□□□□ -0.35
SNED1-205ENST00000405547 TCEAL6Q6IPX3 200 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 GALNT7Q86SF2 657 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 SLC15A4Q8N697 577 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 EDDM13A0A1B0GTR0 161 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 A8MV72 311 aaPredicted RBP12.85□□□□□ -0.35
SNED1-205ENST00000405547 NME4O00746 187 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
SNED1-205ENST00000405547 VAMP1P23763 118 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 BDKRB1P46663 353 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 BTN3A2P78410 334 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 ISCA2Q86U28 154 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 SLC22A15Q8IZD6 547 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
SNED1-205ENST00000405547 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
SNED1-205ENST00000405547 ZNF597Q96LX8 424 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 PET100P0DJ07 73 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 ACP5P13686 325 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 NRG3P56975 720 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 FANK1Q8TC84 345 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 PTGDR2Q9Y5Y4 395 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 FDXRP22570 491 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 ZNF267Q14586 743 aaPredicted RBP12.85□□□□□ -0.35
SNED1-205ENST00000405547 HSD17B12Q53GQ0 312 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 ACSL5Q9ULC5 683 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 FUOMA2VDF0 154 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 H3BMQ9 156 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 PLD2O14939 933 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 ARHGEF15O94989 841 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 HSD11B1P28845 292 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 MAGEA12P43365 314 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 ZNF252P-AS1Q0IIN9 211 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 TMEM53Q6P2H8 277 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 C22orf39Q6P5X5 142 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 ZNF101Q8IZC7 436 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 COG8Q96MW5 612 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 HERPUD2Q9BSE4 406 aa12.85□□□□□ -0.35
SNED1-205ENST00000405547 STRA6Q9BX79 667 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms