RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 IL22RA1Q8N6P7 574 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 MORN4Q8NDC4 146 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 MDM1Q8TC05 714 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 TWIST2Q8WVJ9 160 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 MMABQ96EY8 250 aaPredicted RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 ACTL8Q9H568 366 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 MLXIPLQ9NP71 852 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 ADAP2Q9NPF8 381 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP16-204ENST00000399976 PCDHA9Q9Y5H5 950 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 GMEB1Q9Y692 573 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 C4orf51C9J302 202 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 HDAC3O15379 428 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 CNOT3O75175 753 aaKnown RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 ALOX12BO75342 701 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 BCAS2O75934 225 aaPredicted RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 HSPA4LO95757 839 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 GUSBP08236 651 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 PCNAP12004 261 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 ZNF763Q0D2J5 394 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 BST1Q10588 318 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 AIMP2Q13155 320 aaKnown RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 ZNF793Q6ZN11 406 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 CCDC81Q6ZN84 652 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 NDUFAF7Q7L592 441 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 PPP1R32Q7Z5V6 425 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 CLNKQ7Z7G1 428 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 GPR180Q86V85 440 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 CCNYL1Q8N7R7 359 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 OR14A16Q8NHC5 309 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 ZNF75CPQ92670 426 aaPredicted RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 ESAMQ96AP7 390 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 TRIM45Q9H8W5 580 aaPredicted RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 HHATLQ9HCP6 504 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 MMP25Q9NPA2 562 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 KCNK9Q9NPC2 374 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 GIN1Q9NXP7 522 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 NTMQ9P121 344 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 ATP6V1HQ9UI12 483 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 CES1P1Q9UKY3 287 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 PCDHGB6Q9Y5F9 930 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 CLDN16Q9Y5I7 305 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 NTRK1P04629 796 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 FAM58BPP0C7Q3 252 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 SSR2P43308 183 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 RAE1P78406 368 aaKnown RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 KLC1Q07866 573 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 HEPACAMQ14CZ8 416 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 ABRAXAS2Q15018 415 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 ELAVL1Q15717 326 aaKnown RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 AP1ARQ63HQ0 302 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 PLAG1Q6DJT9 500 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 IGFL3Q6UXB1 125 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 COMMD6Q7Z4G1 85 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 R3HCC1LQ7Z5L2 792 aaKnown RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 CDYL2Q8N8U2 506 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 OR7G1Q8NGA0 311 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 OR9A4Q8NGU2 314 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 PSMA8Q8TAA3 256 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 PIWIL2Q8TC59 973 aaKnown RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 COL26A1Q96A83 441 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 MOCOSQ96EN8 888 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 BRINP2Q9C0B6 783 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 KLHL25Q9H0H3 589 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 KLHL31Q9H511 634 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 WDR41Q9HAD4 459 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 INTS9Q9NV88 658 aaKnown RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 DHCR7Q9UBM7 475 aaKnown RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 MRPS2Q9Y399 296 aaKnown RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 FRYLO94915 3013 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 IGHV1-45A0A0A0MS14 117 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 A0A0A6YYC8 382 aaPredicted RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 DYTNA2CJ06 578 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 SAGE2PA6NJ88 616 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 I3L1I5 382 aaPredicted RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 SLC22A2O15244 555 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 ATP1B1P05026 303 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 NR2F6P10588 404 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 ARRB2P32121 409 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 XCR1P46094 333 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 STT3AP46977 705 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 CDH13P55290 713 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 ERVK-8P63133 956 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 ACSM2AQ08AH3 577 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 RUNX2Q13950 521 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 GSTA3Q16772 222 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 METTL21CQ5VZV1 264 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 ACSM2BQ68CK6 577 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 FAM71E1Q6IPT2 247 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 CYP20A1Q6UW02 462 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 Q6ZSR9 355 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 MRGPREQ86SM8 312 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 SPNS2Q8IVW8 549 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 TMEM132CQ8N3T6 1108 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 PPP1R14CQ8TAE6 165 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 HOXB13Q92826 284 aaPredicted RBP7.08□□□□□ -1.28
USP16-204ENST00000399976 C19orf60Q96EN9 201 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 IMMP1LQ96LU5 166 aa7.08□□□□□ -1.28
USP16-204ENST00000399976 F2RL3Q96RI0 385 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms