RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 E2F2Q14209 437 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 CST6Q15828 149 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 HACD2Q6Y1H2 254 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 C3orf49Q96BT1 292 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 DIRAS2Q96HU8 199 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 TESMINQ9Y4I5 508 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 LATS1O95835 1130 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SHISA6Q6ZSJ9 500 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 TMED4Q7Z7H5 227 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 LAPTM4BQ86VI4 370 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 C10orf107Q8IVU9 208 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 PYROXD2Q8N2H3 581 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 C17orf50Q8WW18 174 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 BEX2Q9BXY8 128 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 BEX1Q9HBH7 125 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 MAN2C1Q9NTJ4 1040 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 P2RX2Q9UBL9 471 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 HHLA1C9JL84 531 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 NFKBIEO00221 500 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 DLDP09622 509 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 C6P13671 934 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 GSTM4Q03013 218 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SLC18A2Q05940 514 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 GANABQ14697 944 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 KCTD19Q17RG1 926 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SLCO6A1Q86UG4 719 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 TRIM73Q86UV7 250 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 XYLT1Q86Y38 959 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 TWIST2Q8WVJ9 160 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 FBXL8Q96CD0 374 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 PPM1MQ96MI6 270 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 TREX2Q9BQ50 279 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SUCNR1Q9BXA5 334 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 ACTR6Q9GZN1 396 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 EIF5A2Q9GZV4 153 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 NANOGQ9H9S0 305 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SLCO1B3Q9NPD5 702 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 BORCS7-ASMTA0A0B4J1R7 106 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 FAM240BA0A1B0GVZ2 78 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF670-ZNF695F2Z2N8 137 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PMM2O15305 246 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 HOXB6P17509 224 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF280AP59817 542 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 C15orf52Q6ZUT6 534 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 OR2T12Q8NG77 320 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TOE1Q96GM8 510 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 RNF39Q9H2S5 420 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 KCNIP1Q9NZI2 227 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 MCTS1Q9ULC4 181 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF175Q9Y473 711 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 NPFFR2Q9Y5X5 522 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PDE4DIPQ5VU43 2346 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PAHP00439 452 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 MGST1P10620 155 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 IFNGR1P15260 489 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 GKP32189 559 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TARDBPQ13148 414 aaKnown RBP eCLIP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 RNF220Q5VTB9 566 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TMPRSS7Q7RTY8 843 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TRIB2Q92519 343 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ALG3Q92685 438 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ITM2CQ9NQX7 267 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ATRNL1Q5VV63 1379 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 LEFTY1O75610 366 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PVALBP20472 110 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 SDHBP21912 280 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF648Q5T619 568 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 LCLAT1Q6UWP7 414 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF461Q8TAF7 563 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PIWIL1Q96J94 861 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 A0A0U1RQF3 1178 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TGM5O43548 720 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ZNF30P17039 623 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 POU3F2P20265 443 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 DAOAP59103 153 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 DSTNP60981 165 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TRIM61Q5EBN2 209 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 HAGHLQ6PII5 290 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 GOLM1Q8NBJ4 401 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 STK35Q8TDR2 534 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 RLN3Q8WXF3 142 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PEX11GQ96HA9 241 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 PGAM5Q96HS1 289 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TM9SF2Q99805 663 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ARNT2Q9HBZ2 717 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 KCPQ6ZWJ8 1503 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 A0A0J9YYE9 177 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 TCRBV9S1A1TA0A576 114 aa10.57□□□□□ -0.72
CACNA1C-216ENST00000399638 GLOD5A6NK44 160 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms