RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DNAJA1P31689 397 aaKnown RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 HNF1BP35680 557 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ARF3P61204 181 aaPredicted RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ARF1P84077 181 aaKnown RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ROR2Q01974 943 aaKnown RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 THOC7Q6I9Y2 204 aaKnown RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 TICAM1Q8IUC6 712 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 PHF7Q9BWX1 381 aaPredicted RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 HAPLN2Q9GZV7 340 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 GLS2Q9UI32 602 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ITGB1BP2Q9UKP3 347 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF670-ZNF695F2Z2N8 137 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 SEC14L5O43304 696 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 RLN2P04090 185 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 HMGN1P05114 100 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ANXA8P13928 327 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 CD36P16671 472 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 MAZP56270 477 aaKnown RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 DCDC1P59894 354 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 MGAT3Q09327 533 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 FAM78AQ5JUQ0 283 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 CCDC80Q76M96 950 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 DNAJB8Q8NHS0 232 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 HSPBAP1Q96EW2 488 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 CCNL2Q96S94 520 aaPredicted RBP13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 UCK2Q9BZX2 261 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 UCKL1Q9NWZ5 548 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 HSFX1Q9UBD0 423 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC22A2O15244 555 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 THEGLP0DJG4 465 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 G6PDP11413 515 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 FAM214AQ32MH5 1076 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 LRRTM3Q86VH5 581 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 RNF130Q86XS8 419 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ZDHHC1Q8WTX9 485 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 ANKRA2Q9H9E1 313 aa13.71□□□□□ -0.21
PCDHA11-201ENST00000398640 TP53I11O14683 189 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 SYT16Q17RD7 645 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 BEND4Q6ZU67 534 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF100Q8IYN0 542 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 PSKH2Q96QS6 385 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 CGREF1Q99674 301 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF69Q9UC07 566 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 RARRES3Q9UL19 164 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 SMIM30A4D0T7 59 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 LATO43561 262 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 GALNT2Q10471 571 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 OCLNQ16625 522 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 SLC35F1Q5T1Q4 408 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 PDPRQ8NCN5 879 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 ACTL8Q9H568 366 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 PPP4R1LQ9P1A2 415 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 GIMAP2Q9UG22 337 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 MEMO1Q9Y316 297 aa13.71□□□□□ -0.22
PCDHA11-201ENST00000398640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 SAGE2PA6NJ88 616 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 PLP2Q04941 152 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 MSS51Q4VC12 460 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 HMGN2P46Q86SG4 172 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 CYTH4Q9UIA0 394 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 H3BNX3 289 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 M0QX08 132 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 BPNT1O95861 308 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 CD70P32970 193 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 PBX2P40425 430 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 ARPC4P59998 168 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 LAPTM4AQ15012 233 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 TMEM44Q2T9K0 475 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 LHX8Q68G74 356 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 SHKBP1Q8TBC3 707 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 TMBIM1Q969X1 311 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 BORCS8Q96FH0 119 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 TMEM74Q96NL1 305 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 HSD3B7Q9H2F3 369 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 KCNK13Q9HB14 408 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 FARSAQ9Y285 508 aaKnown RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 DLX3O60479 287 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 AGTR2P50052 363 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 OR2B6P58173 313 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 NPTX1Q15818 432 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 APCDD1Q8J025 514 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 C10orf82Q8WW14 230 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 RAB8BQ92930 207 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 PBX4Q9BYU1 374 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 FBRSL1Q9HCM7 1045 aaKnown RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 ACSL5Q9ULC5 683 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 OAZ3Q9UMX2 235 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 DNMT3AQ9Y6K1 912 aaPredicted RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 RCBTB2O95199 551 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 SMSP52788 366 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 S100A10P60903 97 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 MRPS21P82921 87 aaKnown RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 TMPPEQ6ZT21 453 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 ZNF554Q86TJ5 538 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 ZC3HC1Q86WB0 502 aaKnown RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 TRMT2BQ96GJ1 504 aaKnown RBP13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 TBX21Q9UL17 535 aa13.7□□□□□ -0.22
PCDHA11-201ENST00000398640 FEZF1A0PJY2 475 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms