RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 HIST2H2ACQ16777 129 aaPredicted RBP12.91□□□□□ -0.34
SEC13-205ENST00000397101 TCTE1Q5JU00 501 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 SH2D4BQ5SQS7 431 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 ICE2Q659A1 982 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 HIST2H2AA3Q6FI13 130 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 LINC00696Q6ZRV3 163 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 TTLL10Q6ZVT0 673 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 FAM20CQ8IXL6 584 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 CCT6BQ92526 530 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 ZNF285Q96NJ3 590 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 CDK15Q96Q40 435 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 OR4K3Q96R72 315 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 RNF32Q9H0A6 362 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 ZNF395Q9H8N7 513 aaPredicted RBP12.91□□□□□ -0.34
SEC13-205ENST00000397101 ZBTB26Q9HCK0 441 aa12.91□□□□□ -0.34
SEC13-205ENST00000397101 A0A1W2PPV9 198 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 FITM1A5D6W6 292 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 PPP6CO00743 305 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 OR7A17O14581 309 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 OR4F21O95013 312 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 SNUPNO95149 360 aaKnown RBP12.9□□□□□ -0.34
SEC13-205ENST00000397101 CLDN9O95484 217 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 CHEK2O96017 543 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 C1GALT1C1LP0DN25 315 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 PEBP1P30086 187 aaKnown RBP12.9□□□□□ -0.34
SEC13-205ENST00000397101 LSP1P33241 339 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 ABATP80404 500 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 PRDX1Q06830 199 aaKnown RBP12.9□□□□□ -0.34
SEC13-205ENST00000397101 GRM7Q14831 915 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 ATG9BQ674R7 924 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 NXPE4Q6UWF7 544 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 MCATQ8IVS2 390 aaKnown RBP12.9□□□□□ -0.34
SEC13-205ENST00000397101 KBTBD2Q8IY47 623 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 KRT78Q8N1N4 520 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 CDYL2Q8N8U2 506 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 OR4F6Q8NGB9 312 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 OR52B6Q8NGF0 335 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 OR2A1Q8NGT9 310 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 METTL6Q8TCB7 284 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 PSMF1Q92530 271 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 NEIL2Q969S2 332 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 POM121Q96HA1 1249 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 MAGEB10Q96LZ2 347 aaPredicted RBP12.9□□□□□ -0.34
SEC13-205ENST00000397101 ZNF382Q96SR6 550 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 SPOCK3Q9BQ16 436 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 FAM107BQ9H098 131 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
SEC13-205ENST00000397101 SLCO1B3Q9NPD5 702 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 CUTCQ9NTM9 273 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 RAP2CQ9Y3L5 183 aa12.9□□□□□ -0.34
SEC13-205ENST00000397101 H7BY64 318 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 PRICKLE3O43900 615 aaPredicted RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 UNC5CO95185 931 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 ESRRBO95718 433 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 SNRPB2P08579 225 aaKnown RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 PCNAP12004 261 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 CXCR2P25025 360 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 GRK3P35626 688 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 RPL14P50914 215 aaKnown RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 CCR8P51685 355 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 SMSP52788 366 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 CASP6P55212 293 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 MEF2AQ02078 507 aaPredicted RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 GALNT1Q10472 559 aaPredicted RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 LAPTM5Q13571 262 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 DOC2AQ14183 400 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 NAA25Q14CX7 972 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 RBBP5Q15291 538 aaKnown RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 CPSF6Q16630 551 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEC13-205ENST00000397101 FAM214AQ32MH5 1076 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 ZC3H12BQ5HYM0 836 aaKnown RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 PAGE2BQ5JRK9 111 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 CATSPEREQ5SY80 951 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 LIPJQ5W064 366 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 CES4AQ5XG92 561 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 CPLX4Q7Z7G2 160 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 KIRREL3Q8IZU9 778 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 ZNF781Q8N8C0 355 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 ACBD4Q8NC06 268 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 OR2L3Q8NG85 312 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 AGAP11Q8TF27 550 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 PTCD3Q96EY7 689 aaKnown RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 CHMP6Q96FZ7 201 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 PRAP1Q96NZ9 151 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 AIF1LQ9BQI0 150 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 DPH7Q9BTV6 452 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 NTMT1Q9BV86 223 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 C20orf27Q9GZN8 174 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 CCDC134Q9H6E4 229 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 SOX17Q9H6I2 414 aaPredicted RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 PELI2Q9HAT8 420 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 PNPOQ9NVS9 261 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 SEC14L3Q9UDX4 400 aa12.89□□□□□ -0.35
SEC13-205ENST00000397101 MARCOQ9UEW3 520 aaPredicted RBP12.89□□□□□ -0.35
SEC13-205ENST00000397101 ZDHHC2Q9UIJ5 367 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms