RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 ZDHHC12Q96GR4 267 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 TGM7Q96PF1 710 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 SLC22A7Q9Y694 548 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 H3BNX3 289 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 DNAJA2O60884 412 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 KRT36O76013 467 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 MED26O95402 600 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 GSNP06396 782 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 TCN1P20061 433 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-204ENST00000396548 ALDH4A1P30038 563 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 CCT8P50990 548 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 HBA1P69905 142 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 GAB1Q13480 694 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 RUNX2Q13950 521 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 MLC1Q15049 377 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 NR0B2Q15466 257 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 PROX2Q3B8N5 592 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 PRSS42Q7Z5A4 293 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 PSMA8Q8TAA3 256 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 NCSTNQ92542 709 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 RERGQ96A58 199 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-204ENST00000396548 DUS3LQ96G46 650 aaKnown RBP12.05□□□□□ -0.48
TRIM39-204ENST00000396548 AURKBQ96GD4 344 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-204ENST00000396548 PANX1Q96RD7 426 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 SERINC2Q96SA4 455 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 MAPKAP1Q9BPZ7 522 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 RNPEPL1Q9HAU8 725 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 LYARQ9NX58 379 aaKnown RBP12.05□□□□□ -0.48
TRIM39-204ENST00000396548 SH3BP4Q9P0V3 963 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 FITM1A5D6W6 292 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 SRPX2O60687 465 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 CER1O95813 267 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 C8BP07358 591 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 EFNA1P20827 205 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 GCGRP47871 477 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 MVDP53602 400 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ZC3H12BQ5HYM0 836 aaKnown RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PERM1Q5SV97 790 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 RNF111Q6ZNA4 994 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PRSS41Q7RTY9 318 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 TMPRSS9Q7Z410 1059 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 SHISA5Q8N114 240 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 CSNK1A1LQ8N752 337 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 OR6C4Q8NGE1 309 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ZFP90Q8TF47 636 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 JADE3Q92613 823 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 C10orf90Q96M02 699 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ROGDIQ9GZN7 287 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 EPS8L2Q9H6S3 715 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PRDM9Q9NQV7 894 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PCDHB3Q9Y5E6 796 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 TCRBV3S1A0A5B6 114 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 EME2A4GXA9 379 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PGRMC2O15173 223 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PRKRAO75569 313 aaKnown RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 AIFM1O95831 613 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 GPX2P18283 190 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 OR4D2P58180 307 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 VSX2P58304 361 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 TGM3Q08188 693 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 BNIP2Q12982 314 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 SUZ12Q15022 739 aaKnown RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 INAVAQ3KP66 663 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 C18orf63Q68DL7 685 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 GUSBP11Q6P575 273 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 AAGABQ6PD74 315 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 DNAJC14Q6Y2X3 702 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ABHD13Q7L211 337 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 NATD1Q8N6N6 113 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 DCLRE1BQ9H816 532 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 GPATCH2Q9NW75 528 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 L3MBTL1Q9Y468 752 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 WASHC1A8K0Z3 465 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 GALR3O60755 368 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 MSL3P1P0C860 447 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ALPPL2P10696 532 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ATP6V1B2P21281 511 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 NUBP1P53384 320 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 LIM2P55344 173 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 FLOT2Q14254 428 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 DEFB110Q30KQ9 67 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 LCN8Q6JVE9 175 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ZNF574Q6ZN55 896 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 BHLHE22Q8NFJ8 381 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-204ENST00000396548 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 STARD5Q9NSY2 213 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 ACTR3BQ9P1U1 418 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PDP2Q9P2J9 529 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 PCDHGA5Q9Y5G8 931 aa12.04□□□□□ -0.48
TRIM39-204ENST00000396548 FAM86C2PA6NEL3 165 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 URADA6NGE7 173 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 MYO1GB0I1T2 1018 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 DUX1O43812 170 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 C6orf47O95873 294 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 ABCB1P08183 1280 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 ALOX12P18054 663 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 C6orf163Q5TEZ5 329 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms