RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ALDH16A1Q8IZ83 802 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 TDHQ8IZJ6 230 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 OR2L3Q8NG85 312 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 RPLP0P6Q8NHW5 317 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 MSLNLQ96KJ4 702 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 SRMSQ9H3Y6 488 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 RIBC2Q9H4K1 309 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 ACSL6Q9UKU0 697 aa15.38■□□□□ 0.05
SNX6-202ENST00000396526 CHD9Q3L8U1 2897 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 A0A1B0GTW7 788 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 LRIT2A6NDA9 550 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 SLC16A6O15403 523 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 LCMT2O60294 686 aaKnown RBP15.37■□□□□ 0.05
SNX6-202ENST00000396526 ARAFP10398 606 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 COX20Q5RI15 118 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 REEP3Q6NUK4 255 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 CEACAM20Q6UY09 585 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 GEMIN6Q8WXD5 167 aaKnown RBP15.37■□□□□ 0.05
SNX6-202ENST00000396526 MSANTD3Q96H12 275 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 POLR1BQ9H9Y6 1135 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 RAB23Q9ULC3 237 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 TRIM64CA6NLI5 447 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 H3BSA7 217 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 SCAMP1O15126 338 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 ZW10O43264 779 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 ERI3O43414 337 aaKnown RBP15.37■□□□□ 0.05
SNX6-202ENST00000396526 RASGRP1O95267 797 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 ITGAMP11215 1152 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 CASP9P55211 416 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 IL5RAQ01344 420 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 ILF3Q12906 894 aaKnown RBP eCLIP15.37■□□□□ 0.052e-7■■■■□ 19.3
SNX6-202ENST00000396526 MPEG1Q2M385 716 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 ZNF852Q6ZMS4 543 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 OR4E2Q8NGC2 313 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 OR1E3Q8WZA6 343 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 EPYCQ99645 322 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 POLMQ9NP87 494 aaPredicted RBP15.37■□□□□ 0.05
SNX6-202ENST00000396526 PSME2Q9UL46 239 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 HSPE1-MOB4S4R3N1 261 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 COL4A3Q01955 1670 aa15.37■□□□□ 0.05
SNX6-202ENST00000396526 TOR1BO14657 336 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 VILLO15195 856 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 DIRAS1O95057 198 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 ETS2P15036 469 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 RGS1Q08116 209 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 HSPB3Q12988 150 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 C6orf141Q5SZD1 244 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 ZNF773Q6PK81 442 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 CCDC80Q76M96 950 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TMEM179BQ7Z7N9 219 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 NEURL3Q96EH8 262 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 MAGED4Q96JG8 741 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 SEMA3GQ9NS98 782 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 SCN3BQ9NY72 215 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TAS2R7Q9NYW3 318 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 ZNF451Q9Y4E5 1061 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TCRBV21S2A2A0A5A6 115 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TRIM64A6NGJ6 449 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TNFRSF11BO00300 401 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 C1QCP02747 245 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 PPP2R1BP30154 601 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TPMTP51580 245 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 CRB2Q5IJ48 1285 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TJAP1Q5JTD0 557 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 SZRD1Q7Z422 152 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 ZNF717Q9BY31 904 aaPredicted RBP15.36■□□□□ 0.05
SNX6-202ENST00000396526 ZNF556Q9HAH1 456 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 ENTPD4Q9Y227 616 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 GMPPBQ9Y5P6 360 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 ATG2AQ2TAZ0 1938 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 ACSL1P33121 698 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 RYKP34925 604 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 LTBRP36941 435 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TSFMP43897 325 aaKnown RBP15.36■□□□□ 0.05
SNX6-202ENST00000396526 CDK9P50750 372 aaKnown RBP15.36■□□□□ 0.05
SNX6-202ENST00000396526 MVDP53602 400 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 KCNJ10P78508 379 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 SKIV2LQ15477 1246 aaKnown RBP15.36■□□□□ 0.05
SNX6-202ENST00000396526 OR2L5Q8NG80 312 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 RASSF5Q8WWW0 418 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 NRTNQ99748 197 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 CXorf36Q9H7Y0 433 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 SLC24A3Q9HC58 644 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 TRNAU1APQ9NX07 287 aaKnown RBP15.36■□□□□ 0.05
SNX6-202ENST00000396526 TBC1D29Q9UFV1 150 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 MMP17Q9ULZ9 603 aa15.36■□□□□ 0.05
SNX6-202ENST00000396526 SEMG1P04279 462 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 NDUFV2P19404 249 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 CCT3P49368 545 aaKnown RBP15.35■□□□□ 0.05
SNX6-202ENST00000396526 TP53BP2Q13625 1128 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 NDUFAF5Q5TEU4 345 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 C6orf120Q7Z4R8 191 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 GALNT5Q7Z7M9 940 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 CLVS1Q8IUQ0 354 aaPredicted RBP15.35■□□□□ 0.05
SNX6-202ENST00000396526 TTC29Q8NA56 475 aaPredicted RBP15.35■□□□□ 0.05
SNX6-202ENST00000396526 CREB3L4Q8TEY5 395 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 GIPC3Q8TF64 312 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 ZNF607Q96SK3 696 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 MBOAT4Q96T53 435 aa15.35■□□□□ 0.05
SNX6-202ENST00000396526 AMBRA1Q9C0C7 1298 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms