RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ZNF717Q9BY31 904 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 PITHD1Q9GZP4 211 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 REXO4Q9GZR2 422 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 RAB17Q9H0T7 212 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 ACSS3Q9H6R3 686 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 LIN28AQ9H9Z2 209 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 CHST11Q9NPF2 352 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 PRTFDC1Q9NRG1 225 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 NUDT4Q9NZJ9 180 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 DAPP1Q9UN19 280 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 MMACHCQ9Y4U1 282 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 PCDHGB6Q9Y5F9 930 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 HRH3Q9Y5N1 445 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 CENPEQ02224 2701 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 FBN2P35556 2912 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 TRBV11-1A0A0K0K1C0 115 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 URADA6NGE7 173 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SUPT3HB4E1H0 165 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 K7EPI3 171 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SAP18O00422 153 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 CLGNO14967 610 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SUPT3HO75486 399 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 PRKRAO75569 313 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 URI1O94763 535 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 MYO1DO94832 1006 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SIX3O95343 332 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 TGFB1P01137 390 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SP1P08047 785 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 PRF1P14222 555 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 GCAP28676 217 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 GRNP28799 593 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 PTGER4P35408 488 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 MSH2P43246 934 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 MTTPP55157 894 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 AP2B1P63010 937 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 HSF1Q00613 529 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ID2Q02363 134 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ILF2Q12905 390 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 NAB1Q13506 487 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ART3Q13508 389 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 C3AR1Q16581 482 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SLC25A25Q6KCM7 469 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 NIPAL1Q6NVV3 410 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 MTFR2Q6P444 385 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 GFRALQ6UXV0 394 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 RAPH1Q70E73 1250 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 LRRC70Q7Z2Q7 622 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 GDF7Q7Z4P5 450 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 KRT78Q8N1N4 520 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 TMEM151AQ8N4L1 468 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SLC5A8Q8N695 610 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ACOT4Q8N9L9 421 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 B3GNT7Q8NFL0 401 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 TTLQ8NG68 377 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 DNAJB8Q8NHS0 232 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ADAMTS18Q8TE60 1221 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 DOK4Q8TEW6 326 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SLC44A1Q8WWI5 657 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ITLN2Q8WWU7 325 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 NCLNQ969V3 563 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SEC16BQ96JE7 1060 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 SERINC2Q96SA4 455 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 UTP23Q9BRU9 249 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 EFCAB11Q9BUY7 163 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 CAPS2Q9BXY5 557 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 OR51B5Q9H339 312 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 CDC42EP4Q9H3Q1 356 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 CNOT10Q9H9A5 744 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 NMRAL1Q9HBL8 299 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ZBTB26Q9HCK0 441 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 PNO1Q9NRX1 252 aaKnown RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 DEPPQ9NTK1 212 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 TXNDC16Q9P2K2 825 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 TEKT2Q9UIF3 430 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ZNF835Q9Y2P0 537 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 ACOT9Q9Y305 439 aa8.25□□□□□ -1.09
ATG4A-205ENST00000394892 KLF2Q9Y5W3 355 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-205ENST00000394892 A0A096LPK6 155 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 A0A0G2JMM0 328 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 A0A1W2PPB8 328 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 A0A1W2PRS3 328 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 A0A1W2PS29 197 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 PINLYPA6NC86 204 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 ANKDD1BA6NHY2 528 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 KIR3DP1A8MWS1 328 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 HRKO00198 91 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 PSMD12O00232 456 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 PPP6CO00743 305 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 ADAM10O14672 748 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 B3GALT2O43825 422 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 FGF17O60258 216 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 NME2P1O60361 137 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 CTNSO60931 367 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 LDB3O75112 727 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 EEDO75530 441 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 SLC25A12O75746 678 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 KLHL2O95198 593 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 UQCRHP07919 91 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 MYBL2P10244 700 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms